DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC3 and HDA9

DIOPT Version :10

Sequence 1:NP_651978.2 Gene:HDAC3 / 44446 FlyBaseID:FBgn0025825 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_190054.2 Gene:HDA9 / 823594 AraportID:AT3G44680 Length:426 Species:Arabidopsis thaliana


Alignment Length:432 Identity:236/432 - (54%)
Similarity:319/432 - (73%) Gaps:18/432 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHSDEYIA 69
            ::||||:.|||:.::|..|||||.||.:||.|::.||||.||::|||:||...:|.:|||.:|:.
plant     6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQFHSPDYVE 70

  Fly    70 YLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLNHNHSDICINW 134
            :||::.|:    |...:...:|.:::|||||||:.||:||.:|.|.:::.|::||:...||.|||
plant    71 FLQRINPE----NQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNNKLCDIAINW 131

  Fly   135 SGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQEAFYLTDRVMTASFHK 199
            :||||||||.:||||||:||:|:|||||||:|||||||||||||||||:||||.||||||.||||
plant   132 AGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK 196

  Fly   200 YGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPIISAIMDFYRPTAIVLQCGAD 264
            :|:.|||||||:.|||...|::|::|||||:||||.|:.::|:.|||.:::.|:|.|||||||||
plant   197 FGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGAD 261

  Fly   265 SLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYTLRNVARCWTHETSLLVDQDIENDLP 329
            |||.||||||:||..||.|||||||:.|:|.||.||||||..|||||||.||.:|:|.::.|::|
plant   262 SLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP 326

  Fly   330 ATEYYDFFAPDFTL-----HPEINSRQDNANSKQYLELIVKHVYENLKMCQHSPSVQMVQTPPDV 389
            ..:|..:|||||:|     |.|      |.|:|.|:..|...:.|||:..||:|||||.:.|||.
plant   327 ENDYIKYFAPDFSLKIPGGHIE------NLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDF 385

  Fly   390 DLEELRSNREEASDPDVRISVADEDKLVDAKNEFYDGDQDQD 431
            .:.:.   .|:..:||||......||.:...:|::|||.|.|
plant   386 YIPDF---DEDEQNPDVRADQRSRDKQIQRDDEYFDGDNDND 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC3NP_651978.2 HDAC3 4..388 CDD:212529 221/387 (57%)
HDA9NP_190054.2 Arginase_HDAC 6..384 CDD:450134 221/387 (57%)

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