DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC3 and hda10

DIOPT Version :10

Sequence 1:NP_651978.2 Gene:HDAC3 / 44446 FlyBaseID:FBgn0025825 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_190052.1 Gene:hda10 / 823592 AraportID:AT3G44660 Length:142 Species:Arabidopsis thaliana


Alignment Length:163 Identity:63/163 - (38%)
Similarity:88/163 - (53%) Gaps:30/163 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 FSLSTKGHGECVKFVKELNVPTLVVGGGGYTLRNVARCWTHETSLLVDQDIENDLPATEYYDFFA 338
            ||:...||.||                ||||..|||||||.||.:|:|.::.|::|..:|..:||
plant     3 FSMLFTGHAEC----------------GGYTKENVARCWTVETGILLDTELPNEIPENDYIKYFA 51

  Fly   339 PDFTL-----HPEINSRQDNANSKQYLELIVKHVYENLKMCQHSPSVQMVQTPPDVDLEELRSNR 398
            |||:|     |.|      |.|:|.|:..|...:.|||:..||:|||||.:.|||..:.:.   .
plant    52 PDFSLKIPGGHIE------NLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDF---D 107

  Fly   399 EEASDPDVRISVADEDKLVDAKNEFYDGDQDQD 431
            |:..:||||:.....||.:...:|::|||.|.|
plant   108 EDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDND 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC3NP_651978.2 HDAC3 4..388 CDD:212529 48/118 (41%)
hda10NP_190052.1 Arginase_HDAC <3..100 CDD:450134 48/118 (41%)

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