DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC3 and hdac7a

DIOPT Version :10

Sequence 1:NP_651978.2 Gene:HDAC3 / 44446 FlyBaseID:FBgn0025825 Length:438 Species:Drosophila melanogaster
Sequence 2:XP_073795699.1 Gene:hdac7a / 798603 ZFINID:ZDB-GENE-150129-1 Length:986 Species:Danio rerio


Alignment Length:354 Identity:81/354 - (22%)
Similarity:137/354 - (38%) Gaps:70/354 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 AGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHSDEYIAY-----LQQVTPQNIQ 80
            :.||....|:....|.:...||..:.:..|..||:.:::...|::.::..     |.::...|.:
Zfish   574 SSHPEHAGRIQSIWSRLQERGLRGQCESIRGRKATLEELQSVHTERHVLLYGTNPLNRLKLDNRK 638

  Fly    81 CNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLNHNHSDICINWSGGL------- 138
            ...:...:.......|                 |..::.....|..|:......:.|.       
Zfish   639 LAGILSQRMFVMLPCG-----------------GVGVDNDTIWNEMHTSTASRMAAGSVTELAFR 686

  Fly   139 -----------------HHAKKFEASGFCYVNDIVIGILELLK--YHPRVLYIDIDVHHGDGVQE 184
                             |||......|||:.|.:.|...:|.:  ...::|.:|.|||||:|.||
Zfish   687 VAKGELKNGFAVVRPPGHHADPSNPMGFCFFNSVAIAAKQLQQKLSASKILIVDWDVHHGNGTQE 751

  Fly   185 AFYLTDRVMTASFHKYGN-YFFPGTGDMYEIGAESGRYYSVNVPLKEGID----DQSYFQVFKPI 244
            .||....|:..|.|:|.| .||||:|...|:|:.:|..::|||....|::    |..|...|:.:
Zfish   752 IFYNDPSVLYISLHRYDNGNFFPGSGGPAEVGSGAGEGFNVNVAWTGGLEPPMADAEYLAAFRTV 816

  Fly   245 ISAIMDFYRPTAIVLQCGADSLAG--DRLGCFSLSTKGHGECVKFVKELNVPTLVVGG------- 300
            :..|...:.|..:::..|.|:..|  ..||.:.::.|    |..|:.. .:.|| .||       
Zfish   817 VMPIAQEFSPDVVLVSSGFDAAEGHPSPLGGYKVTAK----CFGFMTR-QLMTL-AGGRVVLALE 875

  Fly   301 GGYTLRNVARCWTHETSLLVDQDIENDLP 329
            ||:.|  .|.|...|..:.....:|..||
Zfish   876 GGHDL--TAICDASEACVSALLGLEEPLP 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC3NP_651978.2 HDAC3 4..388 CDD:212529 81/354 (23%)
hdac7aXP_073795699.1 None

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