DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC3 and hdac7b

DIOPT Version :9

Sequence 1:NP_651978.2 Gene:HDAC3 / 44446 FlyBaseID:FBgn0025825 Length:438 Species:Drosophila melanogaster
Sequence 2:XP_017212138.1 Gene:hdac7b / 792596 ZFINID:ZDB-GENE-131127-113 Length:751 Species:Danio rerio


Alignment Length:417 Identity:105/417 - (25%)
Similarity:170/417 - (40%) Gaps:90/417 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHSDEYIAYLQQVTPQNIQCNSVAYTKYLAHF 93
            |:....|.:...||..:.|:.:...|:.:::|..||:|.:.:.....|            |.:..
Zfish   356 RVTSIWSRLQECGLRSQCKLLKGRSATVEELLSVHSEELVCFFTGPEP------------YRSQM 408

  Fly    94 SVGEDCPVFDGLFDFCAMYTGASLEGAQKL---NHNHSDICINWSGGL-----------HHAKKF 144
            .:|             .|:.......|.|:   :.....:|:. .|.|           |||.:.
Zfish   409 DIG-------------TMWKNPRNSEALKMAVGSVTELALCVA-RGDLRNGFAVVTPPGHHASRS 459

  Fly   145 EASGFCYVNDIVIG---ILELLKYHPRVLYIDIDVHHGDGVQEAFYLTDRVMTASFHKYGN-YFF 205
            :.......|.:.|.   :.|.||. .::|.:|.|||||.|.:..||....|:..|.|:|.: .||
Zfish   460 QTLDSIVFNSVAIAAKQLQEQLKV-KKILIVDWDVHHGSGTESIFYTDPSVLYISLHRYDDGAFF 523

  Fly   206 PGTGDMYEIGAESGRYYSVNVP----LKEGIDDQSYFQVFKPIISAIMDFYRPTAIVLQCGADSL 266
            .||||...:|.:.||.|:|||.    |:..:.|..|...|:.::..|...:.|..:::..|.|:.
Zfish   524 NGTGDPSRVGCDVGRGYNVNVAWSGGLRPPMGDAEYLAAFRTVVMPIAHEFSPNVVLVSAGFDAA 588

  Fly   267 AGD--RLGCFSLSTKGHGECVKFVKELNVPTLV-VGGGGYTLRNVARCWTHE--TSLLVDQDIEN 326
            .|.  .||.:.:|.|..|...:.:.||....:| |..|||.|  |:.|...:  .|.|:..:.| 
Zfish   589 EGHPAALGGYRVSPKCFGWLTQKLMELAEGRVVLVLEGGYEL--VSLCDASQACVSALLGNEPE- 650

  Fly   327 DLPATEYYDFFAPDFTLHPEINSRQDNANSKQYLELIVKHVYENLKMCQHSPSVQ-MVQTPPDVD 390
              |.:|.            |: .|...||:...||.:: || ::|    |..||: |:.|   |.
Zfish   651 --PLSEV------------EL-LRSPCANAVCSLEKVL-HV-QSL----HWRSVRSMLNT---VS 691

  Fly   391 LEELRSNREEASDPDVRISVADEDKLV 417
            |..:::.|        |:|...|..||
Zfish   692 LSYVKAER--------RVSAGSEAALV 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC3NP_651978.2 HDAC3 4..388 CDD:212529 97/386 (25%)
hdac7bXP_017212138.1 Arginase_HDAC 329..680 CDD:327367 92/374 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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