DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HDAC3 and Hdac7

DIOPT Version :10

Sequence 1:NP_651978.2 Gene:HDAC3 / 44446 FlyBaseID:FBgn0025825 Length:438 Species:Drosophila melanogaster
Sequence 2:XP_036015418.1 Gene:Hdac7 / 56233 MGIID:1891835 Length:977 Species:Mus musculus


Alignment Length:447 Identity:104/447 - (23%)
Similarity:177/447 - (39%) Gaps:104/447 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 HPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHSDEYIAYLQQVTPQNIQCNSVAYT 87
            ||....|:....|.:...||..:.:..|..|||.:::...||:.::..........::.::...|
Mouse   567 HPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLT 631

  Fly    88 KYLAHFS--------VGEDCPVFDGLFDFCAMYTGASLEGAQKLNHNHSDICINWSGGL------ 138
            ..||..:        ||.|.   |.::                 |..||.....|:.|.      
Mouse   632 GLLAQRTFVMLPCGGVGVDT---DTIW-----------------NELHSSNAARWAAGSVTDLAF 676

  Fly   139 ------------------HHAKKFEASGFCYVNDIVIGILELLKY--HPRVLYIDIDVHHGDGVQ 183
                              |||....|.|||:.|.:.|...:|.::  ..::|.:|.|||||:|.|
Mouse   677 KVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDWDVHHGNGTQ 741

  Fly   184 EAFYLTDRVMTASFHKY--GNYFFPGTGDMYEIGAESGRYYSVNVPLKEGID----DQSYFQVFK 242
            :.||....|:..|.|::  || ||||:|.:.|:|..||..::|||....|:|    |..|...|:
Mouse   742 QTFYQDPSVLYISLHRHDDGN-FFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAAFR 805

  Fly   243 PIISAIMDFYRPTAIVLQCGADSLAGD--RLGCFSLSTKGHGECVKFVKELNVPTLVVG-GGGYT 304
            .::..|...:.|..:::..|.|:..|.  .||.:.:|.|..|...:.:..|....:|:. .||:.
Mouse   806 IVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHD 870

  Fly   305 LRNVARCWTHE--TSLLVDQDIENDLPATEYYDFFAPDFTLHPEINSRQDNANSKQYLELIVKHV 367
            |  .|.|...|  .:.|:...::   |.:|             |...::.|.::.:.||.:|: |
Mouse   871 L--TAICDASEACVAALLGNKVD---PLSE-------------ESWKQKPNLSAIRSLEAVVR-V 916

  Fly   368 YENLKMCQHSPSVQMVQTPPDVDLEELRSNREEASDPDVR---------ISVADEDK 415
            :.....|     :|.:.:.||..|.     |...:|.:|.         :.:..||:
Mouse   917 HRKYWGC-----MQRLASCPDSWLP-----RVPGADAEVEAVTALASLSVGILAEDR 963

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC3NP_651978.2 HDAC3 4..388 CDD:212529 96/409 (23%)
Hdac7XP_036015418.1 PHA03247 <124..527 CDD:223021
HDAC7 546..921 CDD:212532 94/393 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.