DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC3 and HDAC7

DIOPT Version :9

Sequence 1:NP_651978.2 Gene:HDAC3 / 44446 FlyBaseID:FBgn0025825 Length:438 Species:Drosophila melanogaster
Sequence 2:XP_011536780.1 Gene:HDAC7 / 51564 HGNCID:14067 Length:1035 Species:Homo sapiens


Alignment Length:441 Identity:104/441 - (23%)
Similarity:174/441 - (39%) Gaps:91/441 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 HPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHSDEYIAY-----LQQVTPQNIQCN 82
            ||....|:....|.:...||..:.:..|..|||.:::...||:.::..     |.::...|.:..
Human   624 HPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLA 688

  Fly    83 SVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLNHNHSDICINWSGGL--------- 138
            .:...:.......|                 |..::.....|..||.....|:.|.         
Human   689 GLLAQRMFVMLPCG-----------------GVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVA 736

  Fly   139 ---------------HHAKKFEASGFCYVNDIVIGILELLKYH--PRVLYIDIDVHHGDGVQEAF 186
                           |||....|.|||:.|.:.|...:|.:..  .::|.:|.|||||:|.|:.|
Human   737 SRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTF 801

  Fly   187 YLTDRVMTASFHKY--GNYFFPGTGDMYEIGAESGRYYSVNVPLKEGID----DQSYFQVFKPII 245
            |....|:..|.|::  || ||||:|.:.|:||.||..::|||....|:|    |..|...|:.::
Human   802 YQDPSVLYISLHRHDDGN-FFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVV 865

  Fly   246 SAIMDFYRPTAIVLQCGADSLAGD--RLGCFSLSTKGHGECVKFVKELNVPTLVVG-GGGYTLRN 307
            ..|...:.|..:::..|.|:..|.  .||.:.:|.|..|...:.:..|....:|:. .||:.|  
Human   866 MPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDL-- 928

  Fly   308 VARCWTHE--TSLLVDQDIENDLPATEYYDFFAPDFTLHPEINSRQDNANSKQYLELIVK-H--- 366
            .|.|...|  .:.|:...::   |.:|             |...::.|.|:.:.||.::: |   
Human   929 TAICDASEACVAALLGNRVD---PLSE-------------EGWKQKPNLNAIRSLEAVIRVHSKY 977

  Fly   367 --VYENLKMCQHSPSVQMVQTPPDVDLEELRSNREEASDPDVRISVADEDK 415
              ..:.|..|..|    .|...|..|.||:.:....||   :.:.:..||:
Human   978 WGCMQRLASCPDS----WVPRVPGADKEEVEAVTALAS---LSVGILAEDR 1021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC3NP_651978.2 HDAC3 4..388 CDD:212529 96/412 (23%)
HDAC7XP_011536780.1 HDAC7 601..978 CDD:212532 92/389 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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