DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC3 and Hdac10

DIOPT Version :9

Sequence 1:NP_651978.2 Gene:HDAC3 / 44446 FlyBaseID:FBgn0025825 Length:438 Species:Drosophila melanogaster
Sequence 2:XP_006520600.1 Gene:Hdac10 / 170787 MGIID:2158340 Length:667 Species:Mus musculus


Alignment Length:419 Identity:103/419 - (24%)
Similarity:170/419 - (40%) Gaps:82/419 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHSDEYIAYLQQVTPQNI----------QC 81
            |:||......:...||.::.......:||.:::...||.||||.:|:.  |.:          |.
Mouse    28 PERLTAALDGLRQRGLEERCLCLSACEASEEELGLVHSPEYIALVQKT--QTLDKEELHALSKQY 90

  Fly    82 NSVAY---TKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLNHNHSDICINWSGGLHHAKK 143
            |:|.:   |.:.|..:.|....:.|      |:.|||.          |:.:.:....| ||:::
Mouse    91 NAVYFHPDTFHCARLAAGAALQLVD------AVLTGAV----------HNGLALVRPPG-HHSQR 138

  Fly   144 FEASGFCYVNDIVIGILELLKYH--PRVLYIDIDVHHGDGVQEAFYLTDRVMTASFHKY--GNY- 203
            ..|:|||..|::.:......:.:  .|:|.:|.|||||.|:|..|.....|:..|:|:|  |:: 
Mouse   139 AAANGFCVFNNVALAAKHAKQKYGLQRILIVDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFW 203

  Fly   204 -FFPGTGDMYEIGAESGRYYSVNVPLKE-GIDDQSYFQVFKPIISAIMDFYRPTAIVLQCGADSL 266
             |.| ..|...:|...|:.::||:|..: |:.:..|...|..::..:...:.|..:::..|.||.
Mouse   204 PFLP-ESDADAVGQGQGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSA 267

  Fly   267 AGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGG-------GGYTLRNVAR--CWTHETSLLVDQ 322
            .||..|    ..:...||...:.:|  ..::.||       |||.|.::|:  |...:| ||.| 
Mouse   268 IGDPEG----QMQATPECFAHLTQL--LQVLAGGRICAVLEGGYHLESLAQSVCMMVQT-LLGD- 324

  Fly   323 DIENDLPATEYYDFFAPDFTLHPEINSRQDNANSKQYLELIVKHVYENLKMCQHSPSVQMVQTPP 387
                  |.........|..:....|.|.|  .....|...:.::|...|....|||         
Mouse   325 ------PTPPLLGLMVPCQSALESIQSVQ--TAQTPYWTSLQQNVAPVLSSSTHSP--------- 372

  Fly   388 DVDLEELRSNREEASDPDVRISVADEDKL 416
                 |.||.|.....|...::   ||.|
Mouse   373 -----EERSLRLLGESPTCAVA---EDSL 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC3NP_651978.2 HDAC3 4..388 CDD:212529 95/389 (24%)
Hdac10XP_006520600.1 Arginase_HDAC 18..354 CDD:388375 89/361 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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