DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC3 and Hdac2

DIOPT Version :10

Sequence 1:NP_651978.2 Gene:HDAC3 / 44446 FlyBaseID:FBgn0025825 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_032255.2 Gene:Hdac2 / 15182 MGIID:1097691 Length:488 Species:Mus musculus


Alignment Length:428 Identity:247/428 - (57%)
Similarity:332/428 - (77%) Gaps:12/428 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RRVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHSDEYI 68
            ::|.|:|:.|:||::||.||||||.|:.:||:|::||||::||:||||:||:|::|.::||||||
Mouse    10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYI 74

  Fly    69 AYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLNHNHSDICIN 133
            .:|:.:.|.|:.    .|:|.:..|:||||||||||||:||.:.||.|:.||.|||...:|:.:|
Mouse    75 KFLRSIRPDNMS----EYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVN 135

  Fly   134 WSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQEAFYLTDRVMTASFH 198
            |:||||||||.||||||||||||:.||||||||.||||||||:||||||:||||.||||||.|||
Mouse   136 WAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFH 200

  Fly   199 KYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPIISAIMDFYRPTAIVLQCGA 263
            |||.| ||||||:.:|||..|:||:||.|:::||||:||.|:||||||.:|:.|:|:|:||||||
Mouse   201 KYGEY-FPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGA 264

  Fly   264 DSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYTLRNVARCWTHETSLLVDQDIENDL 328
            |||:|||||||:|:.|||.:||:.||..|:|.|::||||||:||||||||:||::.:|.:|.|:|
Mouse   265 DSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL 329

  Fly   329 PATEYYDFFAPDFTLH--PEINSRQDNANSKQYLELIVKHVYENLKMCQHSPSVQMVQTPPDVDL 391
            |..:|:::|.|||.||  |   |...|.|:.:|:|.|.:.::|||:|..|:|.|||...|.|...
Mouse   330 PYNDYFEYFGPDFKLHISP---SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVH 391

  Fly   392 EELRSNREEASDPDVRISVADEDKLVDAKNEFYDGDQD 429
            |:  |..|:..|||.|||:...||.:....||.|.:.:
Mouse   392 ED--SGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC3NP_651978.2 HDAC3 4..388 CDD:212529 232/385 (60%)
Hdac2NP_032255.2 HDAC2 9..374 CDD:212535 225/371 (61%)
Histone deacetylase 9..322 203/316 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..488 14/41 (34%)

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