DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HDAC3 and HDAC3

DIOPT Version :10

Sequence 1:NP_651978.2 Gene:HDAC3 / 44446 FlyBaseID:FBgn0025825 Length:438 Species:Drosophila melanogaster
Sequence 2:XP_322018.5 Gene:HDAC3 / 1282023 VectorBaseID:AGAMI1_000192 Length:433 Species:Anopheles gambiae


Alignment Length:435 Identity:354/435 - (81%)
Similarity:391/435 - (89%) Gaps:4/435 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTDRRVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHSD 65
            |..::||||:|.||||||||.||||||.||:|.|.|||||||||||:|||||||||.||.|||||
Mosquito     1 MATKKVSYFFNPDVGNFHYGPGHPMKPHRLSVIHHLVMNYGLHKKMQIYRPYKASAHDMCRFHSD 65

  Fly    66 EYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLNHNHSDI 130
            |||.:||:|||||||    .|||.|:.|:||:|||||||||:|||||||||||||||||||||||
Mosquito    66 EYIEFLQRVTPQNIQ----GYTKCLSVFNVGDDCPVFDGLFEFCAMYTGASLEGAQKLNHNHSDI 126

  Fly   131 CINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQEAFYLTDRVMTA 195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Mosquito   127 CINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQEAFYLTDRVMTV 191

  Fly   196 SFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPIISAIMDFYRPTAIVLQ 260
            ||||||||||||||||||||||||||||||||||||||||||.|||||:|||:|:||:|||||||
Mosquito   192 SFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYVQVFKPVISAVMEFYQPTAIVLQ 256

  Fly   261 CGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYTLRNVARCWTHETSLLVDQDIE 325
            |||||||||||||||||||||||||||||:|||||||||||||||||||||||:|||||:|:.|.
Mosquito   257 CGADSLAGDRLGCFSLSTKGHGECVKFVKDLNVPTLVVGGGGYTLRNVARCWTYETSLLIDETIS 321

  Fly   326 NDLPATEYYDFFAPDFTLHPEINSRQDNANSKQYLELIVKHVYENLKMCQHSPSVQMVQTPPDVD 390
            |:||..:|.:||||||||||:|.|||||||||||||.|.:|||:|||||||:|||||...|.|..
Mosquito   322 NELPMNDYLEFFAPDFTLHPDIPSRQDNANSKQYLEAITRHVYDNLKMCQHAPSVQMFDIPEDAL 386

  Fly   391 LEELRSNREEASDPDVRISVADEDKLVDAKNEFYDGDQDQDKPDS 435
            .|||::.:.|..:||||::..|||:||:.||||:|||.|.||.::
Mosquito   387 PEELKTVKTEEPNPDVRMTQDDEDRLVEPKNEFFDGDNDNDKSEN 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC3NP_651978.2 HDAC3 4..388 CDD:212529 329/383 (86%)
HDAC3XP_322018.5 HDAC3 4..384 CDD:212529 328/379 (87%)

Return to query results.
Submit another query.