DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bem46 and Abhd17a

DIOPT Version :10

Sequence 1:NP_477372.1 Gene:Bem46 / 44441 FlyBaseID:FBgn0025109 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001006984.1 Gene:Abhd17a / 299617 RGDID:1359682 Length:310 Species:Rattus norvegicus


Alignment Length:214 Identity:62/214 - (28%)
Similarity:98/214 - (45%) Gaps:25/214 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 TLLYFHGNAGNMGHRMQNVWGIYHHLHCNVLMVEYRGYGLSTGVPTERGLVTDARAAIDYLHTRH 174
            |:|:.||||.::|.......|:...:.||:...:|.|||:|:|.|:|:.|..|..||...|.||:
  Rat   113 TVLFSHGNAVDLGQMCSFYVGLGTRIGCNIFSYDYSGYGISSGRPSEKNLYADIDAAWQALRTRY 177

  Fly   175 DLDHSQLILFGRSLGGAVVVDVAADTVYGQKLMCAIVENTFSSIPEMAVELVHPAVK------YI 233
            .:....:||:|:|:|....||:|:      :..||.|  ...|.....:.:..|..|      ..
  Rat   178 GISPDSIILYGQSIGTVPTVDLAS------RYECAAV--VLHSPLTSGMRVAFPDTKKTYCFDAF 234

  Fly   234 PNLLFKNKYHSMSKIGKCSVPFLFISGLADNLVPPRMMRALYTKCGSEIKRLLEFPGGSHNDTWI 298
            ||:         .|:.|.:.|.|.|.|..|.::......|||.:|...::.|. ..|..|||..:
  Rat   235 PNI---------EKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLW-VEGAGHNDIEL 289

  Fly   299 VDGYYQAIGGFLA-ELQQQ 316
            ...|.:.:..|:: ||..|
  Rat   290 YSQYLERLRRFISQELPSQ 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bem46NP_477372.1 FrsA 73..312 CDD:440691 59/208 (28%)
Abhd17aNP_001006984.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..61
FrsA 100..305 CDD:440691 59/209 (28%)
Blue background indicates that the domain is not in the aligned region.

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