DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu1 and waw

DIOPT Version :10

Sequence 1:NP_524752.1 Gene:mEFTu1 / 44438 FlyBaseID:FBgn0024556 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001027089.1 Gene:waw / 3771960 FlyBaseID:FBgn0024182 Length:696 Species:Drosophila melanogaster


Alignment Length:252 Identity:48/252 - (19%)
Similarity:83/252 - (32%) Gaps:114/252 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly  1409 VGEISNPSSTSNASMQLQLCLSSPSKENINPNATRRKISNVSSSNGGLDNFSEISSIRS-NCSTP 1472
            :.:.|.||||.:.:             ::|||..|:.|.            |::..:.| |||| 
  Fly    16 LADASTPSSTCDVA-------------HLNPNRDRKFID------------SQLYFLTSCNCST- 54

  Fly  1473 TRTNVAGQLISADRRSNASSTSTPTRGSAMQQQQQQQQLLNASPARSLPRSGALATSGPPSLVDF 1537
                                                 ||             |||::   :|..:
  Fly    55 -------------------------------------QL-------------ALASN---NLKSY 66

  Fly  1538 FAGSTEEKSYTNMSSFYGKNSGVEVLTC-ASIDEMSAVKIPAI-----SSNWWCILEFECQEVRE 1596
            ...||:..||..:|.:   |.|.:...| .|:|...|.....:     .::.|.:|: :|.|.|:
  Fly    67 KINSTQWDSYIALSQW---NGGEKNEACWKSVDRHFAFHFCGVFGGLEINHAWAMLK-DCHESRK 127

  Fly  1597 NSDDLVVFFSTSAEQERFLSMLESIWHTKKSEAFPASIISSDDAVYDHCSKLFLEIN 1653
            ....::          :|:.||..|..:|.::||              |.:.:..||
  Fly   128 QPTCIL----------KFVEMLRDIAESKTTKAF--------------CRRYYHYIN 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu1NP_524752.1 TufA 73..460 CDD:439820
wawNP_001027089.1 LepA 94..695 CDD:440249 18/92 (20%)
Blue background indicates that the domain is not in the aligned region.

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