DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu1 and Tufm

DIOPT Version :9

Sequence 1:NP_001163144.1 Gene:mEFTu1 / 44438 FlyBaseID:FBgn0024556 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_001099765.1 Gene:Tufm / 293481 RGDID:1305501 Length:452 Species:Rattus norvegicus


Alignment Length:461 Identity:286/461 - (62%)
Similarity:354/461 - (76%) Gaps:28/461 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 MSSARMLRMAGATATSTACKDWQRNGLLAAPRTGNMQQYLREY-------------ANEKKVFER 78
            |::|.:||     ||.      :.:||.|:| |..:|..||..             ...||.:.|
  Rat     1 MAAATLLR-----ATP------RFSGLCASP-TPFLQGRLRPLKAPASPFLCRGLAVEAKKTYVR 53

  Fly    79 TKPHCNVGTIGHVDHGKTTLTAAITKVLADKQLAESKKYNEIDNAPEEKARGITINVAHVEYQTE 143
            .|||.|||||||||||||||||||||:||:...|:.|||.||||||||:|||||||.|||||.|.
  Rat    54 DKPHVNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTA 118

  Fly   144 TRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGAMPQTREHMLLAKQIGIDHIVVFINKV 208
            .|||.||||||||||:||||||||.:||.||||||.||.|||||||:|||||||::|:||::||.
  Rat   119 ARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMPQTREHLLLAKQIGVEHVVVYVNKA 183

  Fly   209 DAA-DEEMVDLVEMEIRELLTEMGYDGDKIPVVKGSALCALEDKSPEIGKEAILKLLQEVDSFIP 272
            ||. |.|||:|||:||||||||.||.|::.||:.||||||||.:.||:|.:::.|||..||::||
  Rat   184 DAVQDSEMVELVELEIRELLTEFGYKGEETPVIVGSALCALEQRDPELGVKSVQKLLDAVDTYIP 248

  Fly   273 TPVRELDKPFLLPVENVYSIPGRGTVVTGRLERGVVKKGMECEFVGYNKVLKSTVTGVEMFHQIL 337
            .|.|:|:||||||||:|||||||||||||.||||::|||.|||.:|:||.:::.|||:||||:.|
  Rat   249 VPTRDLEKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECELLGHNKNIRTVVTGIEMFHKSL 313

  Fly   338 EEAQAGDQLGALVRGVKRDDIKRGMVMCKPGSVKALDQLEAQVYILSKDEGGRTKPFMSFIQLQM 402
            |.|:|||.|||||||:||:|::||:||.||||::...::|||||||||:||||.|||:|.....|
  Rat   314 ERAEAGDNLGALVRGLKREDLRRGLVMVKPGSIQPHQKVEAQVYILSKEEGGRHKPFVSHFMPVM 378

  Fly   403 FSRTWDCAVQVQI-PDKEMVMPGEDTKLILRLIRPMVLEQGQRFTLRDGNLTLGTGVVTSTLPPL 466
            ||.|||.|.:|.: |.||:.|||||.||.|.|.:||:||:||||||||||.|:|||:||. :|.:
  Rat   379 FSLTWDMACRVILPPGKELAMPGEDLKLSLILRQPMILEKGQRFTLRDGNKTIGTGLVTD-VPAM 442

  Fly   467 TESQRS 472
            ||..::
  Rat   443 TEEDKN 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu1NP_001163144.1 PRK00049 73..463 CDD:234596 269/391 (69%)
EF_Tu 81..274 CDD:206671 140/193 (73%)
EFTU_II 282..368 CDD:293898 60/85 (71%)
mtEFTU_III 371..462 CDD:294005 57/91 (63%)
TufmNP_001099765.1 PRK00049 47..439 CDD:234596 269/392 (69%)
G1. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 64..71 6/6 (100%)
G2. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 105..109 3/3 (100%)
G3. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 126..129 2/2 (100%)
G4. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 181..184 2/2 (100%)
G5. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 219..221 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352847
Domainoid 1 1.000 297 1.000 Domainoid score I1408
eggNOG 1 0.900 - - E1_COG0050
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2490
Inparanoid 1 1.050 559 1.000 Inparanoid score I1058
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D298219at33208
OrthoFinder 1 1.000 - - FOG0002097
OrthoInspector 1 1.000 - - oto98651
orthoMCL 1 0.900 - - OOG6_100780
Panther 1 1.100 - - LDO PTHR43721
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2038
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.800

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