Protein Alignment Sec13 and SEH1H

DIOPT Version :10

• Sequence 1: NP_651977.1
• Gene: Sec13 / 44437
• FlyBaseID: FBgn0024509
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_564830.1
• Gene: SEH1H / 842741
• AraportID: AT1G64350
• Length: 326
• Species: Arabidopsis thaliana
• Alignment Length: 109
• Identity: 23/109 - (21%)
• Similarity: 37/109 - (33%)
• Gaps: 25/109 - (22%)

  Fly    33 DPNYPELDRSKMQMASLN-----------------GLLDTLEHDSTRQLGGGPDDYELVDSLAAR 80
            ||...|..|:.....|||                 ||:|....:..:.|.......:::||...:
plant     8 DPVTTESQRNPQVNVSLNILSQGSTEKSQELRQEPGLMDLASTEFLKSLRAATSPQKVLDSAEDK 72

  Fly    81 LGYPHANGDI-----KRSW-SKMNAAW-GKRLSG-GNRNSGWTK 116
            :.......:|     |..| :.:...| .|:.|| |..|..|.:
plant    73 VSKRRRTREISEAITKERWLALLRDVWKKKKQSGFGVNNDRWMR 116

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sec13	NP_651977.1	WD40	<10..288	CDD:441893	23/109 (21%)
		WD40 repeat	60..101	CDD:293791	6/46 (13%)
		WD40 repeat	106..148	CDD:293791	5/12 (42%)
		WD40 repeat	155..207	CDD:293791
		WD40 repeat	215..256	CDD:293791
		WD40 repeat	264..290	CDD:293791
SEH1H	NP_564830.1	WD40	10..308	CDD:475233	21/107 (20%)
		WD40 repeat	13..54	CDD:293791	8/40 (20%)
		WD40 repeat	60..105	CDD:293791	7/44 (16%)
		WD40 repeat	110..163	CDD:293791	2/7 (29%)
		WD40 repeat	171..222	CDD:293791
		WD40 repeat	229..277	CDD:293791