DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec13 and SEH1L

DIOPT Version :10

Sequence 1:NP_651977.1 Gene:Sec13 / 44437 FlyBaseID:FBgn0024509 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_011524044.1 Gene:SEH1L / 81929 HGNCID:30379 Length:441 Species:Homo sapiens


Alignment Length:432 Identity:118/432 - (27%)
Similarity:187/432 - (43%) Gaps:101/432 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QEIDTEHEDMVHHAALDFYGLLLATCSSDGSVRIFHSRKNN--KALAELKGHQGPVWQVAWAHPK 68
            :.|..:|:|::|..:.||:|..:||||||.||:::...::.  ...|..|.|.|.||:|.||||:
Human     5 RSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRVTWAHPE 69

  Fly    69 FGNILASCSYDRKVIVWKSTTPRD---------WTKLYEYSNHDSSVNSVDFAPSEYGLVLACAS 124
            ||.:|||||:||...||:......         |.|.....:..:||..|.|||...||:||..|
Human    70 FGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCS 134

  Fly   125 SDGSVSVLTCNTEYGVWDAKKIPN------AHTI----GVNAISWCPAQAPD--------PAFDQ 171
            :||.|.         :::|..:.|      .|.|    ..:.|||.|::...        ..::.
Human   135 ADGIVR---------IYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSRISKLIEKMNRAHLYNF 190

  Fly   172 RVTSRSAAVKRLVSGGCDN-----LVKI----WREDNDRWVEEHRLEAHSDWVRDVAWAPSIGLP 227
            .:.| |.|...:::.|.|:     :.|:    :.|:..::.:...|...:|.|.|:|:||::|..
Human   191 HIPS-SRAHSPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRS 254

  Fly   228 RSQIATASQDRHVIVWSSNADLSEWTST---------VLHTFDD---AVWSISWSTTGNILAVTG 280
            ...:|.|::|  |.:::......|.||:         ::..||:   .||.:||:.||.:||.:|
Human   255 FHILAIATKD--VRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSG 317

  Fly   281 GDNNVTLWKENTEGQW----------IRINYES---------GTAIQSKQ--------------P 312
            .|..|.|||.|....|          ..:|..|         |:.|.|.|              |
Human   318 DDGCVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGTSNPSLGSTIPSLQNSLNGSSAGRYFFTP 382

  Fly   313 SHLPHSHSQQQQALQQHQQQAPSHPGPSSDSEHSSNLSNSQL 354
            ...|.:.|:    ...:.|..|..|.|.  .|||.:...:.|
Human   383 LDSPRAGSR----WSSYAQLLPPPPPPL--VEHSCDADTANL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec13NP_651977.1 WD40 <10..288 CDD:441893 95/327 (29%)
WD40 repeat 60..101 CDD:293791 19/49 (39%)
WD40 repeat 106..148 CDD:293791 14/41 (34%)
WD40 repeat 155..207 CDD:293791 11/68 (16%)
WD40 repeat 215..256 CDD:293791 13/49 (27%)
WD40 repeat 264..290 CDD:293791 13/25 (52%)
SEH1LXP_011524044.1 WD40 <11..348 CDD:441893 100/348 (29%)
WD40 repeat 15..55 CDD:293791 13/39 (33%)
WD40 repeat 61..111 CDD:293791 19/49 (39%)
WD40 repeat 116..149 CDD:293791 14/41 (34%)
WD40 repeat 166..232 CDD:293791 11/66 (17%)
WD40 repeat 242..287 CDD:293791 13/46 (28%)
WD40 repeat 301..340 CDD:293791 16/38 (42%)

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