DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec13 and Seh1l

DIOPT Version :9

Sequence 1:NP_001287480.1 Gene:Sec13 / 44437 FlyBaseID:FBgn0024509 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001347863.1 Gene:Seh1l / 72124 MGIID:1919374 Length:417 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec13NP_001287480.1 WD40 10..289 CDD:392136
WD40 repeat 60..101 CDD:293791
WD40 repeat 106..148 CDD:293791
WD40 repeat 155..207 CDD:293791
WD40 repeat 215..256 CDD:293791
WD40 repeat 264..290 CDD:293791
Seh1lNP_001347863.1 WD 1 10..49
WD40 11..306 CDD:330360
WD40 repeat 15..55 CDD:293791
WD 2 55..96
WD40 repeat 61..111 CDD:293791
WD 3 111..152
WD40 repeat 116..149 CDD:293791
WD 4 160..210
WD40 repeat 166..212 CDD:293791
WD 5 217..258
WD40 repeat 222..267 CDD:293791
WD 6 276..315
WD40 repeat 281..320 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D375879at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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