DRSC/TRiP Functional Genomics Resources

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Protein Alignment IKKbeta and IKBKB

DIOPT Version :9

Sequence 1:NP_524751.3 Gene:IKKbeta / 44432 FlyBaseID:FBgn0024222 Length:717 Species:Drosophila melanogaster
Sequence 2:XP_005273547.1 Gene:IKBKB / 3551 HGNCID:5960 Length:805 Species:Homo sapiens


Alignment Length:677 Identity:176/677 - (25%)
Similarity:301/677 - (44%) Gaps:102/677 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GNWERCRNLGEGGFGLVIHWRNRTTGREIATKHIKEMGALSADQQVKLSERWNKELNWSRQFKNF 69
            |.||....||.||||.||.|.|:.||.:||.|..::      :...:..|||..|:...|:..: 
Human    13 GAWEMKERLGTGGFGNVIRWHNQETGEQIAIKQCRQ------ELSPRNRERWCLEIQIMRRLTH- 70

  Fly    70 PHIVAGVDIEDPDFLEYLNGMFSAKLPVIVLEYCNGGDVRKRLQSPENANGLTEFEVRQILGALR 134
            |::||..|:.     |.:..:....||::.:|||.|||:||.|...||..||.|..:..:|..:.
Human    71 PNVVAARDVP-----EGMQNLAPNDLPLLAMEYCQGGDLRKYLNQFENCCGLREGAILTLLSDIA 130

  Fly   135 KALHFLHSQCGICHRDLKPDNIVIQRGVDGKKIYKLTDFGLARGTPDQTMVQSVVGTRHYYAPEV 199
            .||.:||.. .|.||||||:|||:|:| :.:.|:|:.|.|.|:.....::..|.|||..|.|||:
Human   131 SALRYLHEN-RIIHRDLKPENIVLQQG-EQRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPEL 193

  Fly   200 VENGFYNSTVDLWSFGVIAYELVTGELPFIP-------HQTLKNIILNLIKKPAKCIAITEDPED 257
            :|...|..|||.||||.:|:|.:||..||:|       |..::       :|....|.::||...
Human   194 LEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVR-------QKSEVDIVVSEDLNG 251

  Fly   258 NTRFVNQFELPQTHHLSRPWAAQFTKWLASPLNSNYKERGQLAANNVPVVFADLDKILNMNVLTI 322
            ..:|.:  .||..::|:...|.:..|||...|..:.::||..........|..||.|||:.::.|
Human   252 TVKFSS--SLPYPNNLNSVLAERLEKWLQLMLMWHPRQRGTDPTYGPNGCFKALDDILNLKLVHI 314

  Fly   323 FAVNNCERLEYAVSAEMTMKDLIALIVLDTGMDEKELYF-------VLPTSHPHKTITP----KS 376
            ..:.......|.|:.:.:::.|.|.|..|||:.|::...       ::|.....:.|:.    :.
Human   315 LNMVTGTIHTYPVTEDESLQSLKARIQQDTGIPEEDQELLQEAGLALIPDKPATQCISDGKLNEG 379

  Fly   377 TPLQLYVEEWSDTSKDSRKWTKRSNPPVMLYIFQVKKECDYKIPEPILSILS--RKFIANKFKTK 439
            ..|.:.:....|.||             :.|..|:.....   ||.:..||.  ::.:| .|:.:
Human   380 HTLDMDLVFLFDNSK-------------ITYETQISPRPQ---PESVSCILQEPKRNLA-FFQLR 427

  Fly   440 ERWLQKRVVLDMLYVLTKEQARYEMLVSGINERALSLEDEMMENSFIDSIDKQRIIISFAYDQLT 504
            :.|.|   |...:..|.::..|.:.     .:|| ::.:.:..||.:..:.          :.:.
Human   428 KVWGQ---VWHSIQTLKEDCNRLQQ-----GQRA-AMMNLLRNNSCLSKMK----------NSMA 473

  Fly   505 SLLKEAQAKIPSRQLISSAQWEKLNRNYNFIIQSAKSIRSFLEACLREAKDMVKTTNQL-----R 564
            |:.::.:||:...:.......||.:....|.|.|.|.:.::.|  :.:|.::....|::     |
Human   474 SMSQQLKAKLDFFKTSIQIDLEKYSEQTEFGITSDKLLLAWRE--MEQAVELCGRENEVKLLVER 536

  Fly   565 KEVCEKDLFDCARFYKKYLCNGAIISPSELNNDAEEFAKSRFKLYNEGEARHLPKSIDHMHYLYF 629
            ....:.|:.|..|........|.:       :|.||.|:..::...| :.|......|       
Human   537 MMALQTDIVDLQRSPMGRKQGGTL-------DDLEEQARELYRRLRE-KPRDQRTEGD------- 586

  Fly   630 KTKESIPVLLQQFCDIKKEIFQINLQM 656
             ::|.:.:|||.....:|::..|..|:
Human   587 -SQEMVRLLLQAIQSFEKKVRVIYTQL 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IKKbetaNP_524751.3 S_TKc 7..245 CDD:214567 90/244 (37%)
PKc_like 13..316 CDD:304357 107/309 (35%)
IKBKBXP_005273547.1 S_TKc 15..290 CDD:214567 104/297 (35%)
STKc_IKK_beta 20..309 CDD:270940 108/311 (35%)
GVQW 785..>805 CDD:290611
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156299
Domainoid 1 1.000 159 1.000 Domainoid score I4088
eggNOG 1 0.900 - - E2759_KOG4250
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1013139at2759
OrthoFinder 1 1.000 - - FOG0003594
OrthoInspector 1 1.000 - - otm41786
orthoMCL 1 0.900 - - OOG6_105964
Panther 1 1.100 - - LDO PTHR22969
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6738
SonicParanoid 1 1.000 - - X2467
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.740

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