DRSC/TRiP Functional Genomics Resources

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Protein Alignment IKKbeta and LOC101732839

DIOPT Version :9

Sequence 1:NP_524751.3 Gene:IKKbeta / 44432 FlyBaseID:FBgn0024222 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001297046.1 Gene:LOC101732839 / 101732839 -ID:- Length:743 Species:Xenopus tropicalis


Alignment Length:772 Identity:197/772 - (25%)
Similarity:317/772 - (41%) Gaps:153/772 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GNWERCRNLGEGGFGLVIHWRNRTTGREIATKHIKEMGALSADQQVKLSERWNKELNWSRQFKNF 69
            |.|:....||.||||.|..::||.||      .:|.:.:...:..:|..|||.:|:...::. |.
 Frog    13 GPWDMKDRLGTGGFGNVCLYQNRETG------ELKAIKSCRLELSMKNKERWCQEIQIMKRL-NH 70

  Fly    70 PHIVAGVDI-EDPDFLEYLNGMFSAKLPVIVLEYCNGGDVRKRLQSPENANGLTEFEVRQILGAL 133
            |::|...:: .:.|||  :|     .:|.:.:|||.|||:||.|..|||..||.|.:|..::..:
 Frog    71 PNVVKACEVPPEMDFL--VN-----DVPHLAMEYCAGGDLRKLLNKPENCCGLKESQVLNLMSDI 128

  Fly   134 RKALHFLHSQCGICHRDLKPDNIVIQRGVDGKKIYKLTDFGLARGTPDQTMVQSVVGTRHYYAPE 198
            ...:.:||.: .|.||||||:|||:|. .:||.::|:.|.|.|:.....::..|.|||..|.|||
 Frog   129 GSGIQYLHEK-RIIHRDLKPENIVLQE-CNGKTVHKIIDLGYAKDLDQGSLCTSFVGTLQYLAPE 191

  Fly   199 VVENGFYNSTVDLWSFGVIAYELVTGELPFIP-------HQTLKNIILNLIKKPAKCIAITEDPE 256
            :.||..|:.|||.||||.:.:|.:.|..||:.       |:.:|       ||..|.|...|:..
 Frog   192 LFENKPYSVTVDYWSFGTMVFECIAGFRPFLHNMQPFTWHEKIK-------KKDHKHIYAYEEMS 249

  Fly   257 DNTRFVNQFELPQTHHLSRPWAAQFTKWLASPLNSNYKERGQLAANNVPVVFADLDKILNMNVLT 321
            ...||.:.  |||.::|......:...||...||.:..:||.......|..|..:|:|||:.::.
 Frog   250 GEIRFSSY--LPQPNNLCSIIVDKIETWLQLLLNWDPIQRGGGMDCGRPQCFVLMDQILNLKIVH 312

  Fly   322 IFAVNNCERLEYAVSAEMTMKDLIALIVLDTGMD--EKELYFVLPTS-HPHKTITPKSTPLQLYV 383
            |..:.:.:...:.:..|.::..|.:.|..:||:.  .:||...:..| .|.|   |.|..:...|
 Frog   313 ILNMTSAKIHSFHLQPEESLHTLQSRIETETGISTCNQELLLEMGVSLDPRK---PASQCVIDGV 374

  Fly   384 EEWSDTSKDSRKWTKRSNPPVMLYIFQVKK-------------EC------DYKIPEPILSILSR 429
            :.|     ||          .|:|:|...|             ||      |.|:..||..:   
 Frog   375 KGW-----DS----------YMVYLFDKSKTVYEGPFQSRSLSECLNYIVQDSKVQLPIPQL--- 421

  Fly   430 KFIANKFKTKERWLQKRVVLDMLYVLTKEQARYEMLVSGINERALSLEDEMMENSFIDSIDKQRI 494
                           ::|..:.::.::..:..|..|..|.....|||      ..|..::.|.:.
 Frog   422 ---------------RKVWAEAVHYVSGLKEDYSRLFQGQRAAMLSL------LRFNTNLTKMKN 465

  Fly   495 IISFAYDQLTSLLKEAQAKIPSRQLISSAQWEKLNRNYNFIIQSAKSIRSFLE-----ACLREAK 554
            .:..|..||.:.|:..:..|       ....|:.:....:.|.|.|.:|::.|     .|..:|.
 Frog   466 TMVSASQQLGAKLQFFKRSI-------EIDLERYSDQMAYGISSEKMLRAWKEMEDKAVCFGKAG 523

  Fly   555 D---MVKTTNQLRKEVCEKDLFDCAR---------------FYKKYLCNGAIISPSELNNDAEEF 601
            .   :.:|...|..|:.|.....|||               .||:....    ||.:..:|:.|.
 Frog   524 KIHFLDETIMGLHTEIVELQKSPCARRQGDVMEHLEQRAMELYKQLKPR----SPDKAYSDSTEM 584

  Fly   602 AKSRFKLYNEGEARHLPKSIDHMHYL-----------------YFKTKESIPVLLQQFCDIKKEI 649
            .|...:.. :|:.|.|.:...|:..|                 ....||:...|:|.....::||
 Frog   585 VKILVQTV-QGQDRVLKELFGHLSKLLGCKQKIIDLLPQIEMTVNNIKEADSSLMQMQAKRQREI 648

  Fly   650 FQINLQML---MSASSTPPPKLELSAAMDRLAISSGSPSSDPFDSLRTINAIEEAER 703
            :.: |::.   .||.|..|..:|........|....|.|...|..|.|.:...|..|
 Frog   649 WHL-LKIACTQSSARSLGPASVETPITPRTSAWPDQSSSQALFSMLTTKDKSREILR 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IKKbetaNP_524751.3 S_TKc 7..245 CDD:214567 86/245 (35%)
PKc_like 13..316 CDD:304357 105/310 (34%)
LOC101732839NP_001297046.1 PKc_like 21..307 CDD:389743 105/310 (34%)
Ubl_IKKA_like 309..385 CDD:340566 19/93 (20%)
IKBKB_SDD 384..657 CDD:375823 56/309 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 152 1.000 Domainoid score I4282
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1013139at2759
OrthoFinder 1 1.000 - - FOG0003594
OrthoInspector 1 1.000 - - otm49011
Panther 1 1.100 - - O PTHR22969
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6738
SonicParanoid 1 1.000 - - X2467
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.050

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