DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbp80 and STO1

DIOPT Version :9

Sequence 1:NP_524750.2 Gene:Cbp80 / 44409 FlyBaseID:FBgn0022942 Length:800 Species:Drosophila melanogaster
Sequence 2:NP_013844.2 Gene:STO1 / 855155 SGDID:S000004732 Length:861 Species:Saccharomyces cerevisiae


Alignment Length:924 Identity:183/924 - (19%)
Similarity:352/924 - (38%) Gaps:224/924 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RRRAHDTEDEGYDH---RRNKRRRVSENQEIEDRLESLILRVGERSTSSVESNLEGLVSVLEADL 64
            :||....|||.|..   |..||:|:....::...:...|..:|| |..:.|.:::.|...:..:.
Yeast     5 KRRGDFDEDENYRDFRPRMPKRQRIPPVVQLCKEMMPDIRTIGE-SVKAFEDDIKFLSEAIMNEY 68

  Fly    65 G---TFRLKILRILSDCAVRMPEKCTVYTTLVGLLNAKNYKFGGEFVDHMVKTFKESLKMCR--- 123
            |   .|...:|..|:...|..|:|......|..::|:||...|...:::.   |:|..|.|:   
Yeast    69 GHEDYFNNALLSTLNAVVVEQPQKQAAIALLTMVVNSKNNVAGKSIINYF---FEELQKWCKQTY 130

  Fly   124 -------------WDAARYSLRFLA---------DLVNCHVISATSLLQLLDTMIDVSNEDTVPQ 166
                         |:..:..||||:         :|:|.:    .||.:|   .|:::|.|...:
Yeast   131 NDEFKSTSNETGPWNKIKLILRFLSILSPMFLVDELINIY----KSLFEL---SIELNNLDPGNR 188

  Fly   167 VRRDWFVFA-VLSTLPWVGRDLYEKKESAL----ESLLLRIEV-YLNKRSKKHHNALRVWSSDAP 225
            |.....::. .|..:|::  ..:.:....|    |.||..:|. ||.|.:  ..|.||.::.:.|
Yeast   189 VPLSEAIYTNTLLNIPYL--FFFNRNNDGLRTKVEELLAYVEQNYLVKTT--DINLLREYNGEPP 249

  Fly   226 HPQEEYLDCLWAQIRK-----LRQDN-----WAEKHIPRPYLVFDSILCEALQHNLPTI------ 274
            :...|.:..:...::|     |.|.|     |  .|:..|. ..|....:||  .||::      
Yeast   250 YEMVELVRVVLPNVKKALINNLEQLNELFPDW--NHLLTPQ-TGDEGFNDAL--TLPSVDDLKSF 309

  Fly   275 ---------------VP--------PPHHDNFEYPMPWVVYRMFDYTDCPDGPNLPGAHSIERFL 316
                           .|        |....|||..:|...|....:.|               .:
Yeast   310 VRLNKNFGSVDSMWKTPRYAFHVYLPNSAGNFETVVPISTYAGQLFND---------------II 359

  Fly   317 IEEHLHHIIETYHHERKDCAAQLLSF--------------------------PYKHKIPLEYCIV 355
            |:     ::|:....||:.|.|:::.                          |......:|...:
Yeast   360 ID-----LVESLEFNRKEVARQVITLDLFFKAGIFTEPGESIAQLIATYEENPLAPTFKIEDLAI 419

  Fly   356 EVVFAELFHMPTPRYLDICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWF 420
            |.:...:|.:|:.......:.::|:::|:..|..:..|..:|....:..:||::.....|:::||
Yeast   420 ETILGLIFKLPSVSQPFAYFYTLLVDICQNSPKAIAPVFGRAFRFFYSHLDSLDFELKLRYLDWF 484

  Fly   421 SYHLSNFKFTWSWDEWDSCLLLDGEH---PRPKFIQEVLQKCLRL-SYHQRITEMMPTTYAKLIP 481
            |..:|||.|:|.|:||:...:..|::   |:..|.:.::||.||| |....:.:.:|..:.|.:.
Yeast   485 SIQMSNFNFSWKWNEWEDDSIKFGKYFYNPKVNFAKNLIQKELRLTSNFSEVEDSLPQEFTKYLD 549

  Fly   482 LTPVPNYKYANEEAANLPGTTVAHQLV----VAIRQKCTP-EEVVNILKDIPNSGYSGEEMSD-- 539
            .:.:|..:..|...:...|.||....|    :..||:..| |..|..:.|..:...:..|:::  
Yeast   550 TSYIPRDQLINYYQSLFTGYTVEEDSVRKNDLYFRQEGVPMENTVRKILDYTHKANNSREVTELE 614

  Fly   540 ----------GS----FNALKIDVFVQTLLNLGSKSFSHSFAAISKFHSVFRAL-----AETEEA 585
                      ||    ||...|.:.||.:.:.||:|.||:...|:......:.:     .:.|..
Yeast   615 SILGELKNEYGSIISDFNRFVIILLVQAVTDSGSRSLSHANKYINDLKEDLKTIFAKIELDIETK 679

  Fly   586 QICILHNIFELWSSHQQMMVVLIDKLLKLQIVDCSAVATWIFSKEMTGEFTKLYLWEILHLTIKK 650
            :..|:..:...|:::.|...::.|......::....:.|:||::  ||              :| 
Yeast   680 EYIIIEAVLTFWNANPQTGFLVADAFKYAGLLTSRTIFTFIFNE--TG--------------LK- 727

  Fly   651 MNKHVIKLNTELSEAKEKLAKADSSSSDSEDDSSHKRKKPITHADKPSEEVVERMEEKLEAANVN 715
             |..:|:. |.:......|::..|..::|.::.....::..|.|:...:.:....:|.:|...||
Yeast   728 -NNGLIEA-TAIEAVFRNLSQQISEENESGNNFEFVFERLCTIANSTIDLLDVNADEDIEIPKVN 790

  Fly   716 QKRLFLIVFQRFIMILSEHLLRSDTDGRDPDTDWYRW----TIGRLQQVFLMHHEQVQKYSSTLE 776
            .:                    .|.|..:.|....:|    .||.::.:       :::||....
Yeast   791 GE--------------------MDIDDIEDDKLDLKWKYFTVIGFIKSI-------LRRYSHEYR 828

  Fly   777 TLL--FTSDLDTHI 788
            .|.  |.:::|..|
Yeast   829 ELADKFIANIDNAI 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cbp80NP_524750.2 MIF4G 31..243 CDD:214713 52/250 (21%)
MIF4G_like 307..473 CDD:286213 39/195 (20%)
MIF4G_like_2 494..764 CDD:286214 53/299 (18%)
STO1NP_013844.2 MIF4G 36..264 CDD:397130 51/242 (21%)
MIF4G_like 346..541 CDD:370287 42/214 (20%)
MIF4G_like_2 581..828 CDD:401145 51/292 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346141
Domainoid 1 1.000 72 1.000 Domainoid score I2209
eggNOG 1 0.900 - - E1_KOG1104
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 114 1.000 Inparanoid score I1347
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005276
OrthoInspector 1 1.000 - - otm46659
orthoMCL 1 0.900 - - OOG6_103433
Panther 1 1.100 - - LDO PTHR12412
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R798
SonicParanoid 1 1.000 - - X3789
TreeFam 00.000 Not matched by this tool.
1211.820

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