DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbp80 and cbc1

DIOPT Version :10

Sequence 1:NP_524750.2 Gene:Cbp80 / 44409 FlyBaseID:FBgn0022942 Length:800 Species:Drosophila melanogaster
Sequence 2:NP_594104.1 Gene:cbc1 / 2542556 PomBaseID:SPAC6G10.07 Length:780 Species:Schizosaccharomyces pombe


Alignment Length:802 Identity:180/802 - (22%)
Similarity:336/802 - (41%) Gaps:158/802 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RRRAHDTEDEGY-DHRRNKRR----RVSE----------NQEIEDRLESLILRVGERST-----S 47
            |:|..:.|:.|: .||.|.:.    |:.:          |....|.:..:.:.:...:.     |
pombe    11 RKRTREGENYGFRPHRGNSQELLAARIKKDITFLADPRGNSVAADDINYVAMSLSREANDPETIS 75

  Fly    48 SVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMP---EKCTVYTTLVGLLNAKNYKFGGEFVD 109
            ::...::....::...:......|:|    .::|:|   ||...|..|....|..::.:      
pombe    76 TILDCIQTTAFIIPVKIPHLATLIIR----ASLRVPLILEKAAAYFCLQYFTNLNSFLY------ 130

  Fly   110 HMVKTFKESLKMCRWDAARYSLRFLADLVNCHVISATSLLQLLDTMIDVSNEDTVPQVRRDWFVF 174
                           ..|:..||.|  :.....:...:|..|...:.|..:::|.|.|..|.|:.
pombe   131 ---------------YEAKVDLRML--ICMSFALQPGTLKPLFSLLADAISKETKPSVWGDNFLR 178

  Fly   175 AVLSTLPW---VGRDLYEKKESALESLLLRIEVYLNKRSKK---------HHNALRVWSSDAPHP 227
            .:|..||:   ...|| .||:.|.| :|.:.|:|:..|...         |.|.           
pombe   179 IILINLPYFIAANNDL-GKKDFANE-ILDQCEIYVRHRKSSITLSNPLSIHDNL----------- 230

  Fly   228 QEEYLDCLWAQIRKLRQDNWAEKHIPRPYLVFDS--ILCEALQHNLP--TIVPPPHHDNF-EYPM 287
            .||.||.|:.|:...|::::...:|.:|:..|:|  :....:..::|  |..|.|..:.. .:..
pombe   231 SEEELDLLYKQLILSRENDFTFPYISQPWKFFESDFVHIVPVSPSIPEWTFQPTPQQNELPSFKR 295

  Fly   288 PWVVYRMFDYTDCPDGPNLPGAHSIERFLIEEHLHHIIETYHHERKDCAAQLLS-----FPYK-- 345
            .:.::..|:....||..::  |.||.|.:..:.::|:    ...|.: |||:|:     |.||  
pombe   296 FFELFNNFEIRTTPDASDV--AASIFRDISVDVINHL----EFNRVE-AAQVLTDLDVYFTYKTF 353

  Fly   346 -------HKIP----------LEYCIVEVVFAELFHMPTPRYLDICYGSILIELCKLQPATLPQV 393
                   :::|          .|..|||.|..||.......|..:.|.|:|||.|::.|..|...
pombe   354 ALRGTPVNELPNLDPSESRWKAEDIIVEAVLGELLGSQNTTYKPVYYHSLLIECCRIAPKILAPT 418

  Fly   394 LAQATEILFMRIDSMNTSCFDRFVNWFSYHLSNFKFTWSWDEWDSCLLLDGEHPRPKFIQEVLQK 458
            ..:...:::.....:.....|||::|||:|||||.|.|.|:||...:.||..||:..|::|.:.:
pombe   419 FGRVIRLMYTMSSDLPLQTLDRFIDWFSHHLSNFNFHWKWNEWIPDVELDDLHPKKVFMRETITR 483

  Fly   459 CLRLSYHQRITEMMPTTYAKLIPLTPV-PNYKYANEEAANLPGTTVAHQLVVAIRQKCTPEEVVN 522
            .|.|||:.||::.:|.....|:...|. ||:.|.||   ..|....:.|::.|:|.....||:..
pombe   484 ELILSYYTRISDSLPEELRCLLGEQPSGPNFVYENE---THPLYQQSSQIIEALRLHKPLEELDI 545

  Fly   523 ILKDIPNSGYSGEEMSDGSFNALKIDVFVQTLLNLGSKSFSHSFAAISKFHSVFRALA-ETEEAQ 586
            ||:        .||:.:...:|:::  .:....:|||:||||:.....|..:..:..: ::.:::
pombe   546 ILQ--------SEEIQNSETSAVRL--VMSCAYSLGSRSFSHALNVFEKHLNTLKHFSRKSLDSE 600

  Fly   587 ICILHNIFELWSSHQQMMVVLIDKLLKLQIVDCSAVATWIFSKEMTGEFTKLYLWEILHLTIKKM 651
            |.::..:|..|.......|:.:||:|...|:..:::..|:..:::| .:::.|.|.:::.|..|:
pombe   601 IEVVDELFSFWKLQPFNAVMWLDKMLNYSIISITSIIEWLIKQDVT-IWSRSYTWSLVNTTFNKL 664

  Fly   652 ---------NKHVIKLNTELSEAKE--------KLAKADSSSSDS--------------EDDSSH 685
                     ||....|..|.:|.||        .|....|.::::              |.:...
pombe   665 AARLRRSVSNKEDSSLINEANEEKEIVTNLLLSALRALISENAENIWVSHWLNLMLKYVESNFLS 729

  Fly   686 KRKKPITHADKPSEEVVERMEE 707
            .:|..|..|::|.:|.....:|
pombe   730 VKKDTIEEANEPVQENTSEEQE 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cbp80NP_524750.2 MIF4G 31..243 CDD:214713 44/231 (19%)
MIF4G_like 307..473 CDD:370287 58/189 (31%)
MIF4G_like_2 488..770 CDD:462675 52/252 (21%)
cbc1NP_594104.1 MIF4G 36..249 CDD:397130 47/252 (19%)
MIF4G_like 309..499 CDD:370287 60/196 (31%)
MIF4G_like_2 514..751 CDD:462675 51/250 (20%)

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