Sequence 1: | NP_002433.1 | Gene: | MSI1 / 4440 | HGNCID: | 7330 | Length: | 362 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163602.1 | Gene: | Hrb87F / 48535 | FlyBaseID: | FBgn0004237 | Length: | 385 | Species: | Drosophila melanogaster |
Alignment Length: | 360 | Identity: | 103/360 - (28%) |
---|---|---|---|
Similarity: | 152/360 - (42%) | Gaps: | 59/360 - (16%) |
- Green bases have known domain annotations that are detailed below.
Human 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Human 81 SRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFD 143
Human 144 KTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGM- 207
Human 208 ---DAFMLGIGMLGYPGFQATTYASRSYTGLAPGYTYQFPEFRVERTPLPSAPVLPELTAIPLTA 269
Human 270 YGPMAAAAAAAAVVRGTGSHPWTMAPPPGSTP-----SRTGGFLGTTSPGPMAELYGAANQDSGV 329
Human 330 SSYISAASPAPSTGFGHSL-----GGPLIATAFTN 359 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
MSI1 | NP_002433.1 | RRM1_MSI | 21..96 | CDD:409990 | 32/74 (43%) |
PABP-1234 | <32..339 | CDD:130689 | 87/317 (27%) | ||
RRM2_MSI | 110..183 | CDD:240769 | 26/72 (36%) | ||
Hrb87F | NP_001163602.1 | RRM1_hnRNPA_like | 25..102 | CDD:241022 | 33/76 (43%) |
RRM_SF | 116..188 | CDD:302621 | 26/71 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |