Sequence 1: | NP_002433.1 | Gene: | MSI1 / 4440 | HGNCID: | 7330 | Length: | 362 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
Alignment Length: | 222 | Identity: | 86/222 - (38%) |
---|---|---|---|
Similarity: | 122/222 - (54%) | Gaps: | 14/222 - (6%) |
- Green bases have known domain annotations that are detailed below.
Human 18 DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSR 82
Human 83 HELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTN 147
Human 148 RHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFML 212
Human 213 GIGMLGYPGFQATTYASRSYTGLAPGY 239 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
MSI1 | NP_002433.1 | RRM1_MSI | 21..96 | CDD:409990 | 36/74 (49%) |
PABP-1234 | <32..339 | CDD:130689 | 77/208 (37%) | ||
RRM2_MSI | 110..183 | CDD:240769 | 28/72 (39%) | ||
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 33/70 (47%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 29/73 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4205 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |