Protein Alignment Rpp30 and RPP1

DIOPT Version :10

• Sequence 1: NP_524749.1
• Gene: Rpp30 / 44392
• FlyBaseID: FBgn0283652
• Length: 297
• Species: Drosophila melanogaster
• Sequence 2: NP_011929.1
• Gene: RPP1 / 856459
• SGDID: S000001104
• Length: 293
• Species: Saccharomyces cerevisiae
• Alignment Length: 301
• Identity: 75/301 - (24%)
• Similarity: 130/301 - (43%)
• Gaps: 26/301 - (8%)

  Fly     9 DFSIPYNKD---DSVLRALLNELVET-------GYKTVAIDQSFDHSKKDPGKRGSEMFPEPHKI 63
            |.::|:.::   |.|....:|.|::|       ||..:||:.:.:||:|.|   .......|..|
Yeast     4 DLNVPWPQNSYADKVTSQAVNNLIKTLSTLHMLGYTHIAINFTVNHSEKFP---NDVKLLNPIDI 65

  Fly    64 EHLRKEFQDK--LRILQRITILYVDVNVAHAMSVSHNLRKFNLIAGQPKTDAALTHCCTAFNGDL 126
            :....|..|:  |::..|||::..|  .:...|:|...:.|:::|..|.::..||...|..:.||
Yeast    66 KRRFGELMDRTGLKLYSRITLIIDD--PSKGQSLSKISQAFDIVAALPISEKGLTLSTTNLDIDL 128

  Fly   127 ITFDPVAGSRL--LVNRKAYQVAVRRGMFFEIKYAPSICDSNNRKDMIKIAQNYCTKGKSKNVIF 189
            :||.  .||||  .:..|:....|.||:..||.|..::.|...|:..:...::.....:|:.::.
Yeast   129 LTFQ--YGSRLPTFLKHKSICSCVNRGVKLEIVYGYALRDVQARRQFVSNVRSVIRSSRSRGIVI 191

  Fly   190 SSGAAHEFQLRGPYDVANLAFIFGLSEDQGKNAVDGHCRELFLKAEARRLGKTIMFLKGNGPIIY 254
            .|||....:.|....|.:|....||..|:...|:......:.|....|........:.|.|....
Yeast   192 GSGAMSPLECRNILGVTSLIKNLGLPSDRCSKAMGDLASLVLLNGRLRNKSHKQTIVTGGGSGNG 256

  Fly   255 SDSSEDEKSTEDEMKGLKPQIGKADAFEVKDGTEHAIKRLK 295
            .|...|.:.. |:::.:|......||.::    .||.||.|
Yeast   257 DDVVNDVQGI-DDVQTIKVVKRSMDAEQL----GHASKRHK 292

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpp30	NP_524749.1	RNase_P_p30	8..226	CDD:396447	60/230 (26%)
RPP1	NP_011929.1	RNase_P_p30	3..227	CDD:396447	60/229 (26%)