Protein Alignment Rpp30 and GAF1

DIOPT Version :9

• Sequence 1: NP_001259808.1
• Gene: Rpp30 / 44392
• FlyBaseID: FBgn0283652
• Length: 297
• Species: Drosophila melanogaster
• Sequence 2: NP_001154789.1
• Gene: GAF1 / 836120
• AraportID: AT5G59980
• Length: 705
• Species: Arabidopsis thaliana
• Alignment Length: 336
• Identity: 90/336 - (26%)
• Similarity: 142/336 - (42%)
• Gaps: 73/336 - (21%)

  Fly     7 FYDFSIPYNK----------DDSVLR-ALLNELVETGYKTVAIDQSFD--HSKKD---------- 48
            |:|.|||||:          ....|| .|..:.:|.||..:|.::|..  .|.||
plant     3 FFDLSIPYNEPPRSGGKEIAGGKTLRLKLATKAMELGYVGIAHNRSIKGVMSDKDSCTIPLLTLG 67

  Fly    49 ------PGKRGSEMFPEPHKIEHLRKEFQDKLRILQRITILYVDVNVAHAMSVSHN---LRKFNL 104
                  |....|..|   |: :.|........|...|:|: :|:.| |...|::..   |:.:::
plant    68 SLIKVAPRLASSVGF---HR-DLLGVPRTTPFRQYTRLTV-HVESN-AQCQSLNSGNPILKSYDI 126

  Fly   105 IAGQPKTDAALTHCCTAFNGDLITFDPVAGSRLLVNRKAYQVAVRRGMFFEIKYAPSICDSNNRK 169
            ||.:|....|..:.|.....|||:.|........:.....:.|::||::|||||:..:.|:..|:
plant   127 IAVRPMNQNAFDYACEKAEVDLISIDFTDKMLFRLKHPMVKAAIQRGIYFEIKYSDILMDAQTRR 191

  Fly   170 DMIKIAQNYCTKGKSKNVIFSSGAAHEFQLRGPYDVANLAFIFGLSEDQGKNAVDGHCRELFLKA 234
            .:|..|:......:.||:|.||||....:||||.||.||.|:.|||.::.:.|:..:||.:..|.
plant   192 QVISNAKLLVDWTRGKNLIISSGAPSVTELRGPNDVINLMFLLGLSAERARAAISKNCRNMIAKV 256

  Fly   235 --------EARRL-----GKTIMFLKGNGPIIYSDSSEDEKSTEDEMKGLKPQIGKAD------- 279
                    ||.|:     |.|.              |.::..:||.||..:...|:.|
plant   257 LKKKRFHKEAVRVELLSAGDTF--------------SLEQPLSEDCMKWDRLSSGEGDMLLDDLA 307

  Fly   280 -AFEVKDGTEH 289
             ||:..:...|
plant   308 KAFDATNVVAH 318

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpp30	NP_001259808.1	RNase_P_p30	8..226	CDD:280117	71/249 (29%)
GAF1	NP_001154789.1	RNase_P_p30	4..248	CDD:280117	71/249 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	80	1.000	Domainoid score	I3014
eggNOG	1	0.900	-	-		E1_COG1603
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1197518at2759
OrthoFinder	1	1.000	-	-		FOG0004460
OrthoInspector	1	1.000	-	-		oto3533
orthoMCL	1	0.900	-	-		OOG6_102854
Panther	1	1.100	-	-	LDO	PTHR13031
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	9	8.780