Protein Alignment Rpp30 and Rpp30

DIOPT Version :9

• Sequence 1: NP_001259808.1
• Gene: Rpp30 / 44392
• FlyBaseID: FBgn0283652
• Length: 297
• Species: Drosophila melanogaster
• Sequence 2: NP_062301.3
• Gene: Rpp30 / 54364
• MGIID: 1859683
• Length: 268
• Species: Mus musculus
• Alignment Length: 241
• Identity: 86/241 - (35%)
• Similarity: 117/241 - (48%)
• Gaps: 17/241 - (7%)

  Fly     7 FYDFSIPYNKDDSVLRALLNELVETGYKTVAIDQSFDHSKKDPGKRGSEMFPEPHKIEHLRKEF- 70
            |.|..:....|...||.|:......||..|||:...|..:|   ||..|   :|..:..|....
Mouse     4 FADLDLRAGSDLKALRGLVETAAHLGYSVVAINHIVDFKEK---KREIE---KPIAVSELFTTLP 62

  Fly    71 --QDK---LRILQRITILYVD---VNVAHAMSVSHNLRKFNLIAGQPKTDAALTHCCTAFNGDLI 127
              |.|   ::||.|:||:..|   .||..|  .|..:|.::::|..|||:......||..:.||:
Mouse    63 IVQGKSRPIKILTRLTIIVTDPAHCNVLRA--TSSRVRLYDIVAVFPKTEKLFHVACTHLDVDLV 125

  Fly   128 TFDPVAGSRLLVNRKAYQVAVRRGMFFEIKYAPSICDSNNRKDMIKIAQNYCTKGKSKNVIFSSG 192
            .............|....||:.||:.||:.|.|:|.|:..|:..|..|.|.....|.||||.||.
Mouse   126 CITVTEKLPFYFKRPPVNVAIERGLGFELVYGPAIRDATMRRYTISNALNLMQICKGKNVILSSA 190

  Fly   193 AAHEFQLRGPYDVANLAFIFGLSEDQGKNAVDGHCRELFLKAEARR 238
            |....::|||||||||..:|||||:.||.||..:||.:||..|.|:
Mouse   191 AERPLEIRGPYDVANLGLLFGLSENDGKAAVSTNCRAVFLHGETRK 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpp30	NP_001259808.1	RNase_P_p30	8..226	CDD:280117	79/226 (35%)
Rpp30	NP_062301.3	RNase_P_p30	21..224	CDD:280117	75/211 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167849461
Domainoid	1	1.000	105	1.000	Domainoid score	I6663
eggNOG	1	0.900	-	-		E1_COG1603
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H38180
Inparanoid	1	1.050	122	1.000	Inparanoid score	I4739
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54344
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0004460
OrthoInspector	1	1.000	-	-		oto94478
orthoMCL	1	0.900	-	-		OOG6_102854
Panther	1	1.100	-	-	LDO	PTHR13031
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1168
SonicParanoid	1	1.000	-	-		X4844
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	15	14.790