DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nnp-1 and RRP1

DIOPT Version :10

Sequence 1:NP_651976.1 Gene:Nnp-1 / 44391 FlyBaseID:FBgn0022069 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_010372.3 Gene:RRP1 / 851660 SGDID:S000002494 Length:278 Species:Saccharomyces cerevisiae


Alignment Length:321 Identity:69/321 - (21%)
Similarity:128/321 - (39%) Gaps:100/321 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 IRALACNDVVERNRQIRILRKWFKARAGSSFPFNED-DFMRIWKGLYYTMWMSDKPLVQEELAEK 107
            ::.|:.|:...|...:..|:|:..|:   .|..|:. :|.::||||||.||.||:|..|:.||.:
Yeast     7 VKQLSSNNRKTRVNALEALKKYLTAK---QFKENKQIEFNKLWKGLYYAMWFSDRPRPQQRLANE 68

  Fly   108 LAQM------------VDSFGGNTACSLAYFSAFMRTMCQEYFGIDQWRMDKFLMLTRRMVRYLL 160
            |.::            .|....|....:.:...|.:.||.|:|.||::|:||:|:|.||::...|
Yeast    69 LGELHGLYFDPKDNSTADELTTNDKAFIKFSRGFWKVMCFEWFNIDRYRLDKYLLLIRRVLFSQL 133

  Fly   161 RFLKQNNWNADLIAAF-NSSMQLSVMSEQPK-SRGMTMHYLDVFFEELAKAANGEITAAQVNMFL 223
            ::|:..||:..|:..: ...::...:|..|| ..|:.:|.:|:..:|                  
Yeast   134 KYLQSRNWDKKLVDEYIKKVLRWLPLSGSPKVYTGIPIHIVDILLDE------------------ 180

  Fly   224 RPFVTYIATQRDAKLVAQCRTRVLYHLMYQSDLGRQYSEKYNAWKQMGFPTASIDDIEKLDSGFD 288
                                                       |:::            |..|.:
Yeast   181 -------------------------------------------WERL------------LKDGDE 190

  Fly   289 EEDDEVNAEEEQPRATSLDPRAGNVDVHMPELPLNADCVLD-----ELQTQLRTNDFNSKR 344
            :::||.|.|||..:......:....||    :.:..|.|.|     .|:.:::.:.|:..|
Yeast   191 DDEDEENKEEEMRKIAESAKKTPLADV----IAIFQDIVADYNNSKVLREKIKEDLFSDTR 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nnp-1NP_651976.1 Nop52 41..247 CDD:461800 52/217 (24%)
PTZ00121 <374..>570 CDD:173412
RRP1NP_010372.3 Nop52 6..243 CDD:461800 67/315 (21%)
Blue background indicates that the domain is not in the aligned region.

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