DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nnp-1 and Rrp1b

DIOPT Version :9

Sequence 1:NP_651976.1 Gene:Nnp-1 / 44391 FlyBaseID:FBgn0022069 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_082520.2 Gene:Rrp1b / 72462 MGIID:1919712 Length:724 Species:Mus musculus


Alignment Length:708 Identity:180/708 - (25%)
Similarity:294/708 - (41%) Gaps:142/708 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LMVVAQEVKIIRALACNDVVERNRQIRILRKWFKARAGS-SFPFNEDDFMRIWKGLYYTMWMSDK 97
            |.:.:.|.:..:.||.::...|:|.:|.||::..||..| :..|::::.::|||||:|.||:.|:
Mouse     3 LAMQSSEFQFAQRLASSEKGVRDRAVRKLRQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDE 67

  Fly    98 PLVQEELAEKLAQMVDSFGGNTACSLAYFSAFMRTMCQEYFGIDQWRMDKFLMLTRRMVRYLLRF 162
            ||:|||||..::|::.......|..| :...|.:||.:|:.|||:.::||:.||.|.::|.....
Mouse    68 PLLQEELANIISQLIHVVNSLEAQYL-FIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEV 131

  Fly   163 LKQNNWNADLIAAFNSSMQLSVMSEQPKS-RGMTMHYLDVFFEELAKAANGEITAAQVNMFLRPF 226
            ||:|.|....|..|...:...::|.:.:| .|:..|.:||:.|||......|:.|.|....:.||
Mouse   132 LKRNAWEESQITLFLDILMKEILSPESQSPNGVRTHLIDVYLEELTTVGGAELLADQNLKLIDPF 196

  Fly   227 VTYIATQRDAKLVAQCRTRVLYHLMYQSDLGRQYSEKYNAWKQ--MGFPTASIDDIEKLDSG--- 286
            ....|..:|..||......|...::.||....|.|.:....|:  .||||.:: ...|..||   
Mouse   197 CRIAAKTKDHTLVQTVARGVFEVIVDQSACVPQESVEERKTKEDGSGFPTKAL-ACRKAVSGKKA 260

  Fly   287 -FDE--EDDEVNAEEEQPRATSLDPRAGNVDVHMPELPLNAD--CVLD---ELQTQLRTNDFNSK 343
             .||  .|..:.:.|....|...|  :|:        ||..|  .|.|   |:.....|..||.|
Mouse   261 ALDECLRDGVIGSRERDICAALKD--SGS--------PLQFDYKAVADRLLEIANSKSTPPFNRK 315

  Fly   344 RRKGLRKLIQIFETYQRGE-FPLG--------------VRTMPKVEGQTLSEMVEQKVAALDKME 393
            |   |.:|::.|:....|. .||.              .:.:...:|.|:|...|         |
Mouse   316 R---LCRLVRKFQDLCEGNGAPLSSAEDNGQRRHKRKRKKLLESEKGDTVSPAAE---------E 368

  Fly   394 DEVFATGRKLKKLNKSKRKRLLQSINFEEVDEHNYDEVISKALP--PELQKKVNYNAKVRSSINN 456
            |    :|..:.|..:.||||     :..:.|..|.|.|   |:|  |:.:.:.: .|:.::....
Mouse   369 D----SGGHIHKKKRKKRKR-----SHFQPDTQNLDAV---AVPKVPDSESEPD-TAQRQAPCGQ 420

  Fly   457 AWVVEEVKEAEPK-SKKAKKEEP--PQQNKDDQTKVKK--------KSQLKPKNDQSK------- 503
            |.|.|...||... .:.:.|..|  |..||..:.:.||        ||...|:.|.||       
Mouse   421 ACVTEPTAEAVSSIGENSSKPTPVMPIHNKRKRPRKKKLRAHKEICKSTTLPQEDMSKNDAVSGH 485

  Fly   504 -----PKIEDQPTLKAEKEEPAKRKKLDHSKTKEEQSKPKTDEQPKPTPKVEGQSKAKPTP---- 559
                 ..|.....::|:|    :::||  ....:..|.....:...||..|||:......|    
Mouse   486 SQSSAAHISSSEGVQAQK----RKRKL--GALPDSSSDLPVQKSGTPTSPVEGKDGQTTLPRCKR 544

  Fly   560 ---KTKAAGVDDDAPTNGWDAPLEDGEQDIFVPSRKLQVKQANSKLPQSTP------------KQ 609
               ||.::.:|...|::         ::......:|..:|..::.:.:|.|            |:
Mouse   545 SQKKTASSTLDPCDPSS---------QKPAISKKKKKTMKLMSNGVLESNPGQIQALGSNRTLKK 600

  Fly   610 PARAEFATPQTGSGKHVRIVTKSNCIYPKSDYYRQLKLS----PQVPY-DANRLPGKS 662
            |.:.|        ...|:..|:   ..||..::|:.|.|    ||.|. ..|:.|..|
Mouse   601 PLKTE--------DDFVKFDTR---FLPKPLFFRKAKNSSATRPQGPAGQLNKTPSSS 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nnp-1NP_651976.1 Nop52 41..247 CDD:283618 67/207 (32%)
Rrp1bNP_082520.2 Nop52 11..218 CDD:283618 68/207 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..576 57/281 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 625..649 8/23 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 687..724
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849761
Domainoid 1 1.000 135 1.000 Domainoid score I4953
eggNOG 1 0.900 - - E1_KOG3911
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I4517
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1337189at2759
OrthoFinder 1 1.000 - - FOG0003215
OrthoInspector 1 1.000 - - otm43829
orthoMCL 1 0.900 - - OOG6_102179
Panther 1 1.100 - - LDO PTHR13026
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2267
SonicParanoid 1 1.000 - - X2173
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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