DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nnp-1 and rrp1b

DIOPT Version :9

Sequence 1:NP_651976.1 Gene:Nnp-1 / 44391 FlyBaseID:FBgn0022069 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001015923.1 Gene:rrp1b / 548677 XenbaseID:XB-GENE-5721102 Length:612 Species:Xenopus tropicalis


Alignment Length:692 Identity:164/692 - (23%)
Similarity:285/692 - (41%) Gaps:143/692 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VVAQEVKIIRA--LACNDVVERNRQIRILRKWFKARAGS-SFPFNEDDFMRIWKGLYYTMWMSDK 97
            :.:|:..::.|  ||.||...|:|.:|.||.:.:.|:.| |..|.|::|::|||||:|.|||.||
 Frog     1 MASQDAAVLLAQRLAGNDKKTRDRALRKLRNYLRVRSASDSGGFTEEEFIKIWKGLFYCMWMQDK 65

  Fly    98 PLVQEELAEKLAQMVDSFGGNTACSLAYFSAFMRTMCQEYFGIDQWRMDKFLMLTRRMVRYLLRF 162
            ||:||.||:.::|:|.:.....:.:| :...|.:|:.:|:.|||:.|:|||..|.|.::|..:..
 Frog    66 PLLQEALAQSMSQLVHTLHTQESQNL-FLRTFWQTLSREWNGIDRLRLDKFYTLMRMVLRESVEL 129

  Fly   163 LKQNNWNADLIAAFNSSMQLSVMSEQ---PKSRGMTMHYLDVFFEELAKAANGEITAAQVNMFLR 224
            ||:..|....:..|     |::::|:   ..:.|:.:|.:|::.||:||....|:||......:.
 Frog   130 LKKAEWEESSVQEF-----LALLNEEVLKGATLGVQLHLIDIYLEEVAKVGAAELTAEMNLKLIE 189

  Fly   225 PFVTYIATQRDAKLVAQCRTRVLYHLMYQSDLGRQYSEKYNAWKQMGFPTASIDDIEKLDSGFDE 289
            ||...:|..::...:....:.:...::.|:                  |.|..|.::::||..:.
 Frog   190 PFCKIVAKSKNYSFLQAVTSGIFQTILEQA------------------PFAIEDLMKEIDSNPEG 236

  Fly   290 EDDEVNAEEEQPRATSLDPRA---GNVDVHMPELPLNADCVLDELQTQLRTNDFNSKRRKGLRKL 351
            ::.....||...::.|.|..:   .|.|:. |.|..:...|.|.|.......:..::.||....|
 Frog   237 KEGGSAGEESGEKSESEDKESQEQDNEDIG-PVLQFDYQAVADRLFALGSRKNLPTRNRKAAYAL 300

  Fly   352 IQIFETYQRGEFPLGVRTMPKVEGQTLSEMVEQKVAALDKMEDEVFATGRKLKKLNKSKRKRLLQ 416
            ::.|.....|.||              ||...::|:.     ||                     
 Frog   301 VKKFRDLAEGIFP--------------SEDFPEEVST-----DE--------------------- 325

  Fly   417 SINFEEVDEHNYDEVISKALPPELQKKVNYNAKVRSSINNAWVVEEVKEAEPKSKKAKKEEPPQQ 481
                   |:.:|...:.:......|:..:|....|.|..||  |:|.|..:.|......:|...:
 Frog   326 -------DDDDYSSWLFRKRMKRAQENGSYGIVSRLSDGNA--VKEKKREKRKRVGVAPDESKLK 381

  Fly   482 NKDDQTKVKKKSQLKPKNDQSKPKIEDQPTLKAEKEEPAKRKKLDHSKTKEEQSKPKTDEQPKPT 546
            |.....|.|:|.:...:|:.: |..|..|       :|: :..:..|...|..::.|...||.||
 Frog   382 NDPPAAKRKRKRRKTDENNNT-PSQEQAP-------QPS-QNGVAQSCCTENHNEQKGSPQPAPT 437

  Fly   547 PKVE---GQSKAKPTPKTKAAGVDDDA----PTNG-----------------------------W 575
            |..:   ..|| ||..|.:.||:...:    |..|                             .
 Frog   438 PSPDCTPTLSK-KPPGKRRRAGLIRTSLRILPLTGSLLRRRQLRLLRSKCKISQQPMGSSTPEPE 501

  Fly   576 DAPLEDGEQDIFVPSRKLQVKQANSKLPQSTPKQPARAEFATPQTGSGKHVRIVTKS-----NCI 635
            :.||...::....|...:..::|||  |:....:||:|......|..|...:.||.|     ...
 Frog   502 ERPLAPRKEVTSTPQNFMSFQKANS--PKPVYVKPAKARGRQVPTKMGSKSKKVTFSLNKNMTAE 564

  Fly   636 YPKSDYYRQLKLSP----QVPYDANRLPGKSALK-PHWIPGP 672
            :.::|  |.|.:||    :|.::..:.|....|| |...|.|
 Frog   565 FKRTD--RSLLVSPTGSSRVAFNPEQRPDHGVLKTPTSSPAP 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nnp-1NP_651976.1 Nop52 41..247 CDD:283618 68/211 (32%)
rrp1bNP_001015923.1 Nop52 10..212 CDD:283618 68/207 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 126 1.000 Domainoid score I5353
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 147 1.000 Inparanoid score I4309
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1337189at2759
OrthoFinder 1 1.000 - - FOG0003215
OrthoInspector 1 1.000 - - oto104592
Panther 1 1.100 - - LDO PTHR13026
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2173
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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