DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nnp-1 and nop52

DIOPT Version :10

Sequence 1:NP_651976.1 Gene:Nnp-1 / 44391 FlyBaseID:FBgn0022069 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_595749.1 Gene:nop52 / 2541297 PomBaseID:SPBC9B6.07 Length:217 Species:Schizosaccharomyces pombe


Alignment Length:205 Identity:59/205 - (28%)
Similarity:101/205 - (49%) Gaps:24/205 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 IRALACNDVVERNRQIRILRKWFKARAGSSFPFNEDDFMRIWKGLYYTMWMSDKPLVQEELAEKL 108
            |:.||.||...|::.:..|:::...:.    .|...||:::||||:|.|||:||||.|::|::.|
pombe     8 IKKLAANDRKTRDKALESLQRFLSQKK----KFERLDFLKLWKGLFYCMWMADKPLYQQKLSDNL 68

  Fly   109 AQMV-----DSFGGNTACSLAYFSAFMRTMCQEYFGIDQWRMDKFLMLTRRMVRYLLRFLKQNNW 168
            |.:|     |:       .:.:.|.|..||.:|:.|||..|.|||.:|.||......|.::..:.
pombe    69 AALVPIVWIDN-------RILFQSTFWETMGREWTGIDILRTDKFYLLMRRFCAAAFRDIQTRSK 126

  Fly   169 NA---DLIAAFNSSMQLSVMSEQPKS--RGMTMHYLDVFFEELAKAANGEITAAQVNMFLRPFVT 228
            .|   .::|.:|........:.:..:  .|:..|..|::.|||.|....::..|.   :..||.:
pombe   127 TALLDKVVAEYNQMWMDGPFNTENLAFPNGILFHLADIWTEELRKVYPEDVPKAD---WYLPFDS 188

  Fly   229 YIATQRDAKL 238
            .|.:..:..|
pombe   189 TIKSSHNVVL 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nnp-1NP_651976.1 Nop52 41..247 CDD:461800 59/205 (29%)
PTZ00121 <374..>570 CDD:173412
nop52NP_595749.1 Nop52 5..206 CDD:461800 59/205 (29%)
Blue background indicates that the domain is not in the aligned region.

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