DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nnp-1 and rrp-1

DIOPT Version :9

Sequence 1:NP_651976.1 Gene:Nnp-1 / 44391 FlyBaseID:FBgn0022069 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_501798.1 Gene:rrp-1 / 177853 WormBaseID:WBGene00008151 Length:397 Species:Caenorhabditis elegans


Alignment Length:491 Identity:115/491 - (23%)
Similarity:207/491 - (42%) Gaps:114/491 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EVKIIRALACNDVVERNRQIRILRKWFKARAGSSFPFNEDDFMRIWKGLYYTMWMSDKPLVQEEL 104
            ||...:.|||.:...|.|.:|:|..|.:.::.... |::.|.||:.|||:|.|||.||.::||||
 Worm     9 EVVFAQKLACGEPATRQRALRVLHDWIRDQSAKKH-FDDADLMRLCKGLHYVMWMQDKMILQEEL 72

  Fly   105 AEKLAQMVDSFGGNTACSLAYFSAFMRTMCQEYFGIDQWRMDKFLMLTRRMVRYLLRFLKQNNWN 169
            |:::..:::.|..... .:.:.:.|::::.:|:..||:||||||||..|||||.....|.:..|.
 Worm    73 ADRIGGLINIFTSEEE-KVRFVACFLKSLSKEWPHIDRWRMDKFLMEVRRMVRACFTHLAELKWK 136

  Fly   170 ADLIAAFNSSMQ-LSVMSEQPKSRGMTMHYLDVFFEELAKAANGEITAAQVNMFLRPFVTYIATQ 233
            .|:...:....| .::.:::..:..:..|:..:..:||..|  |.:|..||...|:|::..:.. 
 Worm   137 KDIRDEYWKVFQETTISTDKSFNEALKFHFASILLDELDAA--GGLTKKQVTACLKPYIELLGN- 198

  Fly   234 RDAKLVAQCRTRVLYHLMYQSDLGRQYSEKYNAWKQMGFPTASIDDIEKLDSGFDEEDDEVNAEE 298
               |.:::.....||..::::.| :|.|:...|          :::.|::|.             
 Worm   199 ---KDISEYLFTSLYEEIFKTIL-QQKSDLITA----------VEEGEEMDQ------------- 236

  Fly   299 EQPRATSLDPRAGNVDVHMPELPLNADCVLDELQTQLRTNDFNSKRRKGLRKLIQIFETYQRGEF 363
                        |.::....|:    ..:|.|:..|   ...|:||||.:..|::.|:...||:.
 Worm   237 ------------GGIEFSYKEI----GALLFEVGKQ---EHLNAKRRKKIYDLVKKFDKSSRGQD 282

  Fly   364 PLGVRT-MPKVEGQTLSEMVEQKVAALDKMEDEVFATGRKLKKLNKSKRKRLLQSINFEEVDEHN 427
            ||...| :||                                                |.:..|:
 Worm   283 PLHFETPVPK------------------------------------------------ERLTRHD 299

  Fly   428 YDEVISKA--LPPELQKKVNYNAKVRSSINNAWVVEEVKEAEPKSKKAKKEEPPQQNKDDQTKVK 490
            |:|...||  |....:::...:.||:|.|.        |.|...::.|::|.......|:..:||
 Worm   300 YEEAEKKAIVLANSFKQERKSSRKVKSQIK--------KRAREAAEAARQENGDDVPDDEIAEVK 356

  Fly   491 K---KSQLKPKNDQSKPKIEDQPTLKAEKEEPAKRK 523
            |   |....||..:.:|.::.:...|.......|||
 Worm   357 KGNGKKTAVPKVKKGRPLLKAKGVGKKRMVGGLKRK 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nnp-1NP_651976.1 Nop52 41..247 CDD:283618 60/206 (29%)
rrp-1NP_501798.1 Nop52 10..215 CDD:283618 62/212 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167012
Domainoid 1 1.000 114 1.000 Domainoid score I3816
eggNOG 1 0.900 - - E1_KOG3911
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I3245
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1337189at2759
OrthoFinder 1 1.000 - - FOG0003215
OrthoInspector 1 1.000 - - oto18351
orthoMCL 1 0.900 - - OOG6_102179
Panther 1 1.100 - - LDO PTHR13026
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2267
SonicParanoid 1 1.000 - - X2173
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.790

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