DRSC/TRiP Functional Genomics Resources

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Protein Alignment RFeSP and rip1

DIOPT Version :9

Sequence 1:NP_001259876.1 Gene:RFeSP / 44390 FlyBaseID:FBgn0021906 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_595941.1 Gene:rip1 / 2540075 PomBaseID:SPBC16H5.06 Length:228 Species:Schizosaccharomyces pombe


Alignment Length:212 Identity:109/212 - (51%)
Similarity:145/212 - (68%) Gaps:10/212 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 STGLKASGVAVNSMANRQAHTDL-QVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGG 81
            ::.||.|.:.:....:.:.:||. ::||||.|:.:|         |.:..:..||.|||......
pombe    25 ASSLKGSMMTIPKFTSIRTYTDSPEMPDFSEYQTKS---------TGDRSRVISYAMVGTMGALT 80

  Fly    82 AYAAKGLVNTFIGSMSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNV 146
            |..|:..|:.|:.|.||||:||||:|.|:.||.|||||::..||:|||:||||||..||:...:|
pombe    81 AAGAQATVHDFLASWSASADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSV 145

  Fly   147 PTSTLRDPEADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 211
            ..||||||:||..||.||||||:||||||||||||..|||:||::|||||||||.|||||:||||
pombe   146 DISTLRDPQADSDRVQKPEWLVMIGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAP 210

  Fly   212 LNLEVPTHEFPNEGLLV 228
            |||.:|.:.|....:::
pombe   211 LNLAIPAYTFEGSKIII 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RFeSPNP_001259876.1 UCR_TM 37..100 CDD:280989 21/63 (33%)
Rieske_proteo 92..230 CDD:273610 89/137 (65%)
Rieske_cytochrome_bc1 107..230 CDD:239552 79/122 (65%)
rip1NP_595941.1 UCR_TM 45..100 CDD:280989 22/63 (35%)
Rieske_proteo 64..228 CDD:273610 97/164 (59%)
Rieske_cytochrome_bc1 108..228 CDD:239552 78/120 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 168 1.000 Domainoid score I920
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4378
Inparanoid 1 1.050 224 1.000 Inparanoid score I892
OMA 1 1.010 - - QHG51988
OrthoFinder 1 1.000 - - FOG0003816
OrthoInspector 1 1.000 - - oto101526
orthoMCL 1 0.900 - - OOG6_101749
Panther 1 1.100 - - LDO PTHR10134
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1597
SonicParanoid 1 1.000 - - X2660
TreeFam 00.000 Not matched by this tool.
1212.000

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