DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sr-CIII and MALRD1

DIOPT Version :9

Sequence 1:NP_524747.1 Gene:Sr-CIII / 44382 FlyBaseID:FBgn0020376 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_011517755.1 Gene:MALRD1 / 340895 HGNCID:24331 Length:2176 Species:Homo sapiens


Alignment Length:287 Identity:69/287 - (24%)
Similarity:107/287 - (37%) Gaps:72/287 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 QGKTW--------------HLGNGNM-MKRYCAKAGCNDIEKQANGTILTATDGLKAEIECD--D 108
            |||.|              ||....: :..|...:..:||..:      ..|..|.|| .|:  |
Human   790 QGKQWLEATIQLGRLSQPFHLSLDKVSLGIYDGVSAIDDIRFE------NCTLPLPAE-SCEGLD 847

  Fly   109 EFVLSGNSFTYCNGTKWII-KLGTCQLANSVGDHS----------CDFEREDMCGWRASKAIPQP 162
            .|        :|..|:..| ||..|.|.:..||.:          |:|| ..:|.|.........
Human   848 HF--------WCRHTRACIEKLRLCDLVDDCGDRTDEVNCAPELQCNFE-TGICNWEQDAKDDFD 903

  Fly   163 WKRISAAADFLKEKCLQQDHTFQSDVEGHFIRLQS------QVHASRTYHFISPIYPRNLTVGHS 221
            |.|.......|....: :|:|. ...:||::.::|      |..|:    .:|||.  |.|....
Human   904 WTRSQGPTPTLNTGPM-KDNTL-GTAKGHYLYIESSEPQAFQDSAA----LLSPIL--NATDTKG 960

  Fly   222 LWFQFELFMFGSEVRNLTISVKPSSMAVEDMWNSFRNICTKL--TVSGDQGPNWKSQSISIDEME 284
            ..|:|...|||..:..|.|        .:.:|:..|.   :|  .:.|:||..|..:.::|...:
Human   961 CTFRFYYHMFGKRIYRLAI--------YQRIWSDSRG---QLLWQIFGNQGNRWIRKHLNISSRQ 1014

  Fly   285 SDFQVVFTVVDPSSLHGDIGIDDVKFI 311
             .||::..........|||.|||:.|:
Human  1015 -PFQILVEASVGDGFTGDIAIDDLSFM 1040

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity