DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sr-CIII and Sr-CI

DIOPT Version :9

Sequence 1:NP_524747.1 Gene:Sr-CIII / 44382 FlyBaseID:FBgn0020376 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001285599.1 Gene:Sr-CI / 33621 FlyBaseID:FBgn0014033 Length:629 Species:Drosophila melanogaster


Alignment Length:327 Identity:133/327 - (40%)
Similarity:187/327 - (57%) Gaps:20/327 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VEILWALRLFMIYMVIQSIASCEPDILLRNGKVTELSSWLLGDSIKFECNPGFSLQGKTWHL--- 67
            :|..|.|.:.:||.:......||..|.|.||.:    ::...:.::|.||.|::|||.....   
  Fly     1 MEFFWTLAVIVIYCIGHIHGRCERSIDLDNGSI----NYRQRNVVRFRCNRGYTLQGTVMQTCDR 61

  Fly    68 -GNGNMMKRYCAKAGCNDIEKQANGTILTATDGLKAEIECDDEFVLSGNSFTYCNGTKWIIKLGT 131
             |.....|.:||..||...|...||.:...:  |:|::.|.|.:||.|....||:|.:|..:||:
  Fly    62 DGRLRGEKPFCASRGCARPEDPENGHVENLS--LRADVVCHDGYVLVGGRTAYCDGERWSTQLGS 124

  Fly   132 CQLANSVGDHSCDFEREDMCGWRASKAIPQPWKRISAAADFLKEKC-LQQDHTFQSDVEGHFIRL 195
            |:.:|...|||||||.||.|||.|.....:||||:|..:|....:. .:.||||:::..||::|:
  Fly   125 CRRSNHTRDHSCDFESEDQCGWEAETTFRRPWKRVSTVSDIHSLRTGPRHDHTFKNESGGHYMRM 189

  Fly   196 QSQVHASRTYHFISPIYPRNLTVGHSLWFQFELFMFGSEVRNLTISVKPSSMAVEDMWNSFRNIC 260
            ::|:.|..:||.:||||||:||:..:..|:|..||||:.|.||.:||||.||.:..|||.||..|
  Fly   190 ETQMGAYGSYHLLSPIYPRSLTLKTACCFRFHYFMFGAGVDNLVVSVKPVSMPMATMWNRFRANC 254

  Fly   261 TKLTVSGDQGPNWKSQSISIDEMESDFQVVFTVVDPSSLHGDIGIDDVKFIK---------SETN 316
            :|..:||.||..|...:||||||:.||||:||..|..|..|||.|||||.:.         |.|.
  Fly   255 SKFEISGQQGTQWLEHTISIDEMQEDFQVIFTATDARSQFGDIAIDDVKLMTGSECGTNGFSTTT 319

  Fly   317 EP 318
            ||
  Fly   320 EP 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sr-CIIINP_524747.1 CCP 27..>62 CDD:153056 11/34 (32%)
MAM 143..310 CDD:279023 83/167 (50%)
MAM 143..310 CDD:99706 83/167 (50%)
Sr-CINP_001285599.1 CCP 22..72 CDD:214478 15/53 (28%)
CCP 77..125 CDD:214478 17/49 (35%)
MAM 131..308 CDD:214533 87/176 (49%)
MAM 136..308 CDD:99706 84/171 (49%)
Somatomedin_B 335..385 CDD:295334
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470083
Domainoid 1 1.000 66 1.000 Domainoid score I9895
eggNOG 1 0.900 - - E1_2CMY0
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006092
OrthoInspector 1 1.000 - - mtm9576
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.840

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