DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17b2 and TIM23

DIOPT Version :9

Sequence 1:NP_001285956.1 Gene:Tim17b2 / 44381 FlyBaseID:FBgn0020371 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_014414.3 Gene:TIM23 / 855751 SGDID:S000005300 Length:222 Species:Saccharomyces cerevisiae


Alignment Length:103 Identity:28/103 - (27%)
Similarity:49/103 - (47%) Gaps:6/103 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GGAFIMGC-VGG--GLFQGLKGFRNAPQGLGRRVAGSVA-AIKTKSPVIGGSFAAWGAVFSIVDC 78
            |..:::|. :||  |:.|||:..  .|...|:....:|. .|..:.|.:|.:.......::|::.
Yeast   102 GAVYLLGLGIGGFSGMMQGLQNI--PPNSPGKLQLNTVLNHITKRGPFLGNNAGILALSYNIINS 164

  Fly    79 SLVHFRQKEDPWNSIVSGAVTGGILASRNGAAAMAGSA 116
            ::...|.|.|...||.:||:||.:..|..|...|..|:
Yeast   165 TIDALRGKHDTAGSIGAGALTGALFKSSKGLKPMGYSS 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17b2NP_001285956.1 Tim17 1..151 CDD:295283 28/103 (27%)
TIM23NP_014414.3 3a0801s02tim23 61..212 CDD:130056 28/103 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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