DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17b2 and TIM17-2

DIOPT Version :9

Sequence 1:NP_001285956.1 Gene:Tim17b2 / 44381 FlyBaseID:FBgn0020371 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_181277.1 Gene:TIM17-2 / 818317 AraportID:AT2G37410 Length:243 Species:Arabidopsis thaliana


Alignment Length:173 Identity:84/173 - (48%)
Similarity:105/173 - (60%) Gaps:7/173 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EYSREPCPHRIVDDCGGAFIMGCVGGGLFQGLKGFRNAPQGLGRRVAGSVAAIKTKSPVIGGSFA 67
            |.||||||.||:||.||||.||.|||..|..:||..|:|:  |.|..|...::...:|..|||||
plant     5 ETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPK--GSRFVGGTQSVSMNAPRTGGSFA 67

  Fly    68 AWGAVFSIVDCSLVHFRQKEDPWNSIVSGAVTGGILASRNGAAAMAGSAIIGGVLLSMIEGLGIF 132
            .||.:||..||::|:.||||||||||::||.|||.|:.|.||.|.:.|||.|||||::|||.||.
plant    68 VWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGGVLLALIEGAGIM 132

  Fly   133 FTRFAA--EQFRNREPHI--MPDANEGYGDFNSSGF-GFPGAQ 170
            ..:..|  :.....:|.:  ||......|.....|. |.||.|
plant   133 LNKVLAQPQNMMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQ 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17b2NP_001285956.1 Tim17 1..151 CDD:295283 77/151 (51%)
TIM17-2NP_181277.1 Tim17 7..147 CDD:295283 74/141 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 130 1.000 Domainoid score I1702
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 168 1.000 Inparanoid score I1558
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1590221at2759
OrthoFinder 1 1.000 - - FOG0001103
OrthoInspector 1 1.000 - - mtm1125
orthoMCL 1 0.900 - - OOG6_101935
Panther 1 1.100 - - O PTHR10485
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X753
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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