DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17b2 and Timm23

DIOPT Version :9

Sequence 1:NP_001285956.1 Gene:Tim17b2 / 44381 FlyBaseID:FBgn0020371 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_058593.2 Gene:Timm23 / 53600 MGIID:1858317 Length:209 Species:Mus musculus


Alignment Length:121 Identity:30/121 - (24%)
Similarity:49/121 - (40%) Gaps:24/121 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FIMG--CVGGGLFQGLKGFRNAPQGLGRRVAGSVAAIKTKSPVI-------G-------GSFAAW 69
            |.:|  |:.|..|..:.|.|     ||.:...|:|..|.::..|       |       ||.|..
Mouse    78 FTIGGCCMTGAAFGAMNGLR-----LGLKETQSMAWSKPRNVQILNMVTRQGALWANTLGSLALL 137

  Fly    70 GAVFSIVDCSLVHFRQKEDPWNSIVSGAVTGGILASRNGAAAMAGSAIIGGVLLSM 125
            .:.|.::   :...|..||..|::.:|.:||.:.....|...:|...:.|..|.|:
Mouse   138 YSAFGVI---IEKTRGAEDDLNTVAAGTMTGMLYKCTGGLRGIARGGLAGLTLTSL 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17b2NP_001285956.1 Tim17 1..151 CDD:295283 30/121 (25%)
Timm23NP_058593.2 3a0801s02tim23 46..191 CDD:130056 30/121 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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