DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17b2 and timm23

DIOPT Version :9

Sequence 1:NP_001285956.1 Gene:Tim17b2 / 44381 FlyBaseID:FBgn0020371 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_001011053.1 Gene:timm23 / 496463 XenbaseID:XB-GENE-994532 Length:209 Species:Xenopus tropicalis


Alignment Length:120 Identity:32/120 - (26%)
Similarity:49/120 - (40%) Gaps:24/120 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FIMG--CVGGGLFQGLKGFRNAPQGLGRRVAGSVAAIKTKSPVI-------G-------GSFAAW 69
            |.:|  |:.|..|..:.|.|     ||.:...::|..|.|:..|       |       ||.|..
 Frog    78 FTIGGCCMSGAAFGAVNGLR-----LGFKETQNMAWSKPKNVQILNMVTRQGALWANTLGSLALL 137

  Fly    70 GAVFSIVDCSLVHFRQKEDPWNSIVSGAVTGGILASRNGAAAMAGSAIIGGVLLS 124
            .:.|.::   :...|..||..|:|.:|.:||.:..|..|...:|...:.|..|.|
 Frog   138 YSAFGVI---IEKTRGAEDDLNTIAAGTMTGMLYKSTGGLRGVARGGLAGLALTS 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17b2NP_001285956.1 Tim17 1..151 CDD:295283 32/120 (27%)
timm23NP_001011053.1 3a0801s02tim23 46..191 CDD:130056 32/120 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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