DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tim17b2 and Timm17b

DIOPT Version :9

Sequence 1:NP_001285956.1 Gene:Tim17b2 / 44381 FlyBaseID:FBgn0020371 Length:176 Species:Drosophila melanogaster
Sequence 2:XP_038955701.1 Gene:Timm17b / 317374 RGDID:1561744 Length:199 Species:Rattus norvegicus


Alignment Length:198 Identity:99/198 - (50%)
Similarity:127/198 - (64%) Gaps:28/198 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEEYSREPCPHRIVDDCGGAFIMGCVGGGLFQGLKGFRNAPQGLGRRVAGSVAAIKTKSPVIGGS 65
            ||||:|||||.||||||||||.||.:|||:||.:|||||||.|:..|..||:.|::.::|.||||
  Rat     1 MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAVKGFRNAPVGIRHRFRGSINAVRIRAPQIGGS 65

  Fly    66 FAAWGAVFSIVDCSLVHFRQKEDPWNSIVSGAVTGGILASRN----------------------- 107
            ||.||.:||.:||.||..|.||||||||.|||:||.:||:|:                       
  Rat    66 FAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSECFQPLTPVLALFCLPFLSCVSF 130

  Fly   108 ----GAAAMAGSAIIGGVLLSMIEGLGIFFTRFAAEQFRNREPHIMPDANEGYGDFNSSGFGFPG 168
                |..||.|||::||:||::|||:||..||:.|:||||..| .:.|.|:......:...|:|.
  Rat   131 CLPGGPLAMVGSAMMGGILLALIEGVGILLTRYTAQQFRNAPP-FLEDPNQLTPKEGAPAPGYPN 194

  Fly   169 AQQ 171
            .||
  Rat   195 YQQ 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17b2NP_001285956.1 Tim17 1..151 CDD:295283 93/176 (53%)
Timm17bXP_038955701.1 Tim17 1..198 CDD:413300 99/198 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345896
Domainoid 1 1.000 168 1.000 Domainoid score I3719
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H135958
Inparanoid 1 1.050 225 1.000 Inparanoid score I3409
OMA 1 1.010 - - QHG54844
OrthoDB 1 1.010 - - D1590221at2759
OrthoFinder 1 1.000 - - FOG0001103
OrthoInspector 1 1.000 - - mtm8951
orthoMCL 1 0.900 - - OOG6_101935
Panther 1 1.100 - - O PTHR10485
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X753
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

Return to query results.
Submit another query.