DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and YPT7

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_013713.1 Gene:YPT7 / 855012 SGDID:S000004460 Length:208 Species:Saccharomyces cerevisiae


Alignment Length:209 Identity:71/209 - (33%)
Similarity:116/209 - (55%) Gaps:26/209 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVA---LWDTAGAERF 67
            :|::::|:|||||:||:.|:|.:|:.|.:..|||.||.:|.:.|||  .|||   :|||||.|||
Yeast     9 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDG--DKVATMQVWDTAGQERF 71

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNI------AIIVVGNKIDEE-- 124
            :||..:|||.|...:||||:|:..|...:::|   .|.:..:.|:      ..:::|||||.|  
Yeast    72 QSLGVAFYRGADCCVLVYDVTNASSFENIKSW---RDEFLVHANVNSPETFPFVILGNKIDAEES 133

  Fly   125 -RVVDREEGRKFARK--HRALFIETSAKCDQFVSDVFKDVVEKIVSSEYFNNGNASAGLDIASDR 186
             ::|..:..::.|:.  ...||: ||||....|...|:::....:..   |..:..|..|..:|.
Yeast   134 KKIVSEKSAQELAKSLGDIPLFL-TSAKNAINVDTAFEEIARSALQQ---NQADTEAFEDDYNDA 194

  Fly   187 ---DLEASASTCYC 197
               .|:...::|.|
Yeast   195 INIRLDGENNSCSC 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 64/172 (37%)
YPT7NP_013713.1 Rab7 9..182 CDD:206655 65/181 (36%)

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