DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and ARA-2

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_172128.1 Gene:ARA-2 / 837151 AraportID:AT1G06400 Length:216 Species:Arabidopsis thaliana


Alignment Length:183 Identity:75/183 - (40%)
Similarity:113/183 - (61%) Gaps:6/183 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...||::||:||||||:|:.||.:|:|:.....|||::|.:|..:|:|...|..:|||||.||:
plant    11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERY 75

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKIDEERV--VDRE 130
            |::|.::||.|:||:|:||:|...:......||.||..::| |||.::::|||.|...:  |..|
plant    76 RAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTD-PNIVVMLIGNKCDLRHLVAVKTE 139

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVFKDV---VEKIVSSEYFNNGNASAGL 180
            |.:.||.:....|:||||.....|.:.|.:|   :.||||....:.|..||.|
plant   140 EAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESADL 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 66/163 (40%)
ARA-2NP_172128.1 Rab11_like 11..175 CDD:206660 67/164 (41%)

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