DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and RAB7B

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_188512.1 Gene:RAB7B / 821415 AraportID:AT3G18820 Length:206 Species:Arabidopsis thaliana


Alignment Length:171 Identity:63/171 - (36%)
Similarity:98/171 - (57%) Gaps:8/171 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERFRSL 70
            :|::::|:|||||:||:.::|..||...:..|||.||.:|.:|.:...:.:.:|||||.|||:||
plant     9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSL 73

  Fly    71 TPSFYRKALGAILVYDITSRDSLVKLETWLAEL---DSYSDNPNIAIIVVGNKID----EERVVD 128
            ..:|||.|...:||||:.|..|...|..|..|.   .|.||..|...:::|||:|    ..|||.
plant    74 GVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLIGNKVDVDDGNSRVVS 138

  Fly   129 REEGRKF-ARKHRALFIETSAKCDQFVSDVFKDVVEKIVSS 168
            .::.:.: |.|....:.|||||....|.:.|:.:.:..:.|
plant   139 EKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKS 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 62/166 (37%)
RAB7BNP_188512.1 Rab7 9..182 CDD:206655 63/171 (37%)

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