DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and RABE1e

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_187601.1 Gene:RABE1e / 820148 AraportID:AT3G09900 Length:218 Species:Arabidopsis thaliana


Alignment Length:200 Identity:78/200 - (39%)
Similarity:120/200 - (60%) Gaps:13/200 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |..||||:||:||||||.|:.||.::.|..:...|||:|||.:.:::||...|:.:|||||.|||
plant    13 DYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQERF 77

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSY-SDNPNIAIIVVGNKID---EERVVD 128
            |::|.::||.|:|.:||||:|...|...:..|:..::.: ||:.|  .|:||||.|   .:|.|.
plant    78 RTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVN--KILVGNKADMDESKRAVP 140

  Fly   129 REEGRKFARKHRALFIETSAKCDQFVSDVF----KDVVEKIVSSEYFNNGNASAGLDIASDRDLE 189
            ..:|:..|.::...|.|||||.:|.|..||    ||:.:::..|:   ......|:.|......:
plant   141 TSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESD---TKAEPQGIKITKQDANK 202

  Fly   190 ASAST 194
            ||:|:
plant   203 ASSSS 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 71/166 (43%)
RABE1eNP_187601.1 Rab8_Rab10_Rab13_like 13..180 CDD:206659 72/168 (43%)

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