DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and RAB6A

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_181989.1 Gene:RAB6A / 819069 AraportID:AT2G44610 Length:208 Species:Arabidopsis thaliana


Alignment Length:206 Identity:71/206 - (34%)
Similarity:112/206 - (54%) Gaps:23/206 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERFRSLT 71
            ||:.:|:..|||:|:|.||:.:|||..:..|||:||.||.|.::....::.||||||.||||||.
plant    11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 75

  Fly    72 PSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDREEGRK 134
            ||:.|.:..|::|||:.||.|.:....|:.|:.: ....::.:::||||.|  ::|.|..||...
plant    76 PSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRT-ERGSDVIVVLVGNKTDLVDKRQVSIEEAEA 139

  Fly   135 FARKHRALFIETSAKCDQFVSDVFKDVVEKIVSSEYFN-------------NGNASAGLDIASDR 186
            .||:...:|||||||....:..:|:.:...:...|..:             :.||:|.|      
plant   140 KARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSNANASL------ 198

  Fly   187 DLEASASTCYC 197
             .:..:..|.|
plant   199 -AQQQSGGCSC 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 64/159 (40%)
RAB6ANP_181989.1 Rab6 10..170 CDD:206654 64/159 (40%)

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