DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and rab35a

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:XP_073807212.1 Gene:rab35a / 796454 ZFINID:ZDB-GENE-131030-1 Length:201 Species:Danio rerio


Alignment Length:168 Identity:71/168 - (42%)
Similarity:111/168 - (66%) Gaps:4/168 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|||:||:||||||||:.||.:|.|..::..|||:|||.:.::::|...|:.:|||||.|||
Zfish     6 DYLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERF 70

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKIDE--ERVVDRE 130
            |::|.::||...|.|:|||:||.:|.|.::.||.|::...|  ::..|:||||.|:  .:||:..
Zfish    71 RTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD--DVCRILVGNKNDDPASKVVETN 133

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIVSS 168
            :.:|||.:......|||||.:..|.|:|..:.|.::.:
Zfish   134 DAQKFAEQMGIRLFETSAKENLNVEDMFNCITELVLKA 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 70/160 (44%)
rab35aXP_073807212.1 None

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