DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and rasef

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001072877.1 Gene:rasef / 780339 XenbaseID:XB-GENE-1002559 Length:722 Species:Xenopus tropicalis


Alignment Length:156 Identity:61/156 - (39%)
Similarity:96/156 - (61%) Gaps:9/156 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ADRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAER 66
            |::|.|:::.|::.|||||.:.|..:|:|..|...|:|:||:.|.:.|||....:.||||||.||
 Frog   519 AEKAYKIVLAGDAAVGKSSFLMRLCKNEFRGNTSATLGVDFQMKTLVVDGEPTILQLWDTAGQER 583

  Fly    67 FRSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKIDEERV----- 126
            |||:..|::|:|.|.:|:||:|...|.:.:..|:..::. :.:..|.|::||||.|..::     
 Frog   584 FRSIAKSYFRRADGVLLLYDVTCEKSFLNVREWIDMIED-ATSEAIPIMMVGNKADLRQLMAEQG 647

  Fly   127 ---VDREEGRKFARKHRALFIETSAK 149
               |....|.|.:|.:.|||.|||||
 Frog   648 HICVSTNYGEKLSRTYGALFCETSAK 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 59/152 (39%)
rasefNP_001072877.1 FRQ1 <9..70 CDD:444056
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..109
EnvC 213..>357 CDD:443969
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..384
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..491
Rab 523..687 CDD:206640 59/152 (39%)
Blue background indicates that the domain is not in the aligned region.

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