DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab18 and RAB8B

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_057614.1 Gene:RAB8B / 51762 HGNCID:30273 Length:207 Species:Homo sapiens


Alignment Length:202 Identity:76/202 - (37%)
Similarity:124/202 - (61%) Gaps:12/202 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|||:||:|||||:.|:.||.|:.|:.....|||:|||.:.:::||...|:.:|||||.|||
Human     6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERF 70

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDRE 130
            |::|.::||.|:|.:||||||:..|...::.|:..::.::.: ::..:::|||.|  ::|.|.:|
Human    71 RTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASS-DVERMILGNKCDMNDKRQVSKE 134

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVF----KDVVEKIVSSEYFNNGN-ASAG--LDIASDRDL 188
            .|.|.|..:...|:|||||....|.:.|    :|::.|:  :...|:.| |.||  :.|..:|..
Human   135 RGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKL--NRKMNDSNSAGAGGPVKITENRSK 197

  Fly   189 EASASTC 195
            :.|...|
Human   198 KTSFFRC 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 65/164 (40%)
RAB8BNP_057614.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 66/166 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 10/16 (63%)

Return to query results.
Submit another query.