DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and Rab6

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:XP_061510386.1 Gene:Rab6 / 4577653 VectorBaseID:AGAMI1_003514 Length:285 Species:Anopheles gambiae


Alignment Length:186 Identity:71/186 - (38%)
Similarity:109/186 - (58%) Gaps:3/186 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERFR 68
            |..||:.:||..|||:|||.||:.:.||..:..|||:||.||.|.::....::.||||||.||||
Mosquito    12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFR 76

  Fly    69 SLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDREE 131
            ||.||:.|.:..|::|||||:.:|..:...|:.::.: ....::.|::||||.|  ::|.|..||
Mosquito    77 SLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRT-ERGSDVIIMLVGNKTDLSDKRQVSTEE 140

  Fly   132 GRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIVSSEYFNNGNASAGLDIASDRD 187
            |.:.|::...:|||||||....|..:|:.|...:...:...|......:.:|...|
Mosquito   141 GERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDSILLAKPND 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 67/160 (42%)
Rab6XP_061510386.1 None

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