DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and rab11ba

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_999935.1 Gene:rab11ba / 406798 ZFINID:ZDB-GENE-040426-2860 Length:218 Species:Danio rerio


Alignment Length:165 Identity:74/165 - (44%)
Similarity:109/165 - (66%) Gaps:3/165 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...::::||:||||||:|:.||..|:|:.....|||::|.::.:||||...|..:|||||.||:
Zfish     9 DYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 73

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDRE 130
            |::|.::||.|:||:|||||....:...:|.||.||..::|| ||.|::||||.|  ..|.|..:
Zfish    74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADN-NIVIMLVGNKSDLRHLRAVPTD 137

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKI 165
            |.|.||.|:...||||||.....|.:.||:::.:|
Zfish   138 EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 72/160 (45%)
rab11baNP_999935.1 Rab11_like 9..173 CDD:206660 74/165 (45%)

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