DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and Rab26

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster


Alignment Length:194 Identity:72/194 - (37%)
Similarity:119/194 - (61%) Gaps:8/194 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLLVIGESGVGKSSLIRRFVENKFDQNHDV-TIGMDFKSKVMQVDGIDYKVALWDTAGAERFRSL 70
            |::::|:|||||:||:.||.:.::..::.: |:|:||::||:.|||...|:.:|||||.|||||:
  Fly   214 KVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQERFRSV 278

  Fly    71 TPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID---EERVVDREEG 132
            |.::||.|...:|:||:|::.:...:..||.|:..|:.. ::.|:::|||.|   .||.|.||:|
  Fly   279 THAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQE-DVVIVLIGNKADCSGSERQVKREDG 342

  Fly   133 RKFARKHRALFIETSAKCDQFVSDVFKDVVEKIVSSEYFNNGNASAGL-DIASDRDLEASASTC 195
            .:..|:|...|:|||||....|...|..|..::.|..|.:..:....: |..  ||...:.|.|
  Fly   343 ERLGREHNVPFMETSAKTGLNVELSFTAVARQLKSRGYEHGDDGKFNVHDFV--RDNTKARSVC 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 65/161 (40%)
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 72/194 (37%)

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