DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and rab35

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_989019.1 Gene:rab35 / 394615 XenbaseID:XB-GENE-489018 Length:201 Species:Xenopus tropicalis


Alignment Length:172 Identity:73/172 - (42%)
Similarity:113/172 - (65%) Gaps:4/172 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67
            |...|||:||:||||||||:.||.:|.|..::..|||:|||.:.::::|...|:.:|||||.|||
 Frog     6 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERF 70

  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDRE 130
            |::|.::||...|.|:|||:||.:|.|.::.||.|::...|  ::..|:||||.|  |.:||:.|
 Frog    71 RTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD--DVCRILVGNKNDDPERKVVETE 133

  Fly   131 EGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKIVSSEYFN 172
            :..|||.:......|||||.:..|.::|..:.|.::.::..|
 Frog   134 DAYKFAAQMDIQLFETSAKENLNVEEMFNCITELVLRAKKDN 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 71/160 (44%)
rab35NP_989019.1 Rab35 3..201 CDD:133310 73/172 (42%)

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