DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab18 and rab14

DIOPT Version :10

Sequence 1:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_958903.1 Gene:rab14 / 373104 ZFINID:ZDB-GENE-030826-20 Length:215 Species:Danio rerio


Alignment Length:208 Identity:80/208 - (38%)
Similarity:118/208 - (56%) Gaps:22/208 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERFRSLT 71
            |.::||:.|||||.|:.:|.|.||..:...|||::|.:::::|.|...|:.:|||||.||||::|
Zfish    13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKVKLQIWDTAGQERFRAVT 77

  Fly    72 PSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKIDEE--RVVDREEGRK 134
            .|:||.|.||::|||||.|.:...|.:||.:..:.: |||..||::|||.|.|  |.|..||.::
Zfish    78 RSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLT-NPNTVIILIGNKADLEAQRDVTYEEAKQ 141

  Fly   135 FARKHRALFIETSAKCDQFVSDVFKDVVEKIVSSEYFNNGNASAGLDIAS--------------- 184
            ||.::..||:|.|||..:.|.|.|.:..:||    |.|..:.|..|:.|.               
Zfish   142 FAEENGLLFLEASAKTGENVEDAFLEAAKKI----YQNIQDGSLDLNAAESGVQHKPTAPQGGRL 202

  Fly   185 DRDLEASASTCYC 197
            ..|.:.....|.|
Zfish   203 SSDAQPQKEGCSC 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab18NP_524744.2 Rab18 6..165 CDD:206656 70/159 (44%)
rab14NP_958903.1 Rab14 10..175 CDD:133322 73/166 (44%)

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